RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TRMUO75648 421 aaKnown RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 SORBS2O94875 1100 aaKnown RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 CEACAM8P31997 349 aaPredicted RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 EPHX2P34913 555 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 LMO4P61968 165 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 SNRPD1P62314 119 aaKnown RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 BHLHB9Q6PI77 547 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 GALNT5Q7Z7M9 940 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 CRYBG2Q8N1P7 616 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF611Q8N823 705 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 PCYOX1LQ8NBM8 494 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 ELMOD3Q96FG2 381 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 EGFL8Q99944 293 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 PELI2Q9HAT8 420 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 C9orf78Q9NZ63 289 aaPredicted RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 KLHL8Q9P2G9 620 aaPredicted RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 SLC7A7Q9UM01 511 aa4.46□□□□□ -1.7
PRPF39-209ENST00000556353 EXOGQ9Y2C4 368 aaKnown RBP4.46□□□□□ -1.7
PRPF39-209ENST00000556353 RTL9Q8NET4 1388 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 LIPT2A6NK58 231 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 YDJCA8MPS7 323 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 CCER2I3L3R5 266 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 NPHP1O15259 732 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 DCXO43602 365 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 CREB3O43889 395 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 NGFP01138 241 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 EDN1P05305 212 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 TYMPP19971 482 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 EPS15P42566 896 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 PSMC4P43686 418 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 CDH11P55287 796 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 RIPK4P57078 832 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 PPARDQ03181 441 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 TMEM198Q66K66 360 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 FAM109BQ6ICB4 259 aaPredicted RBP4.45□□□□□ -1.7
PRPF39-209ENST00000556353 SARM1Q6SZW1 724 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 METTL7BQ6UX53 244 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 KIF6Q6ZMV9 814 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 GPC2Q8N158 579 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 SCML4Q8N228 414 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 PDILTQ8N807 584 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 POMGNT1Q8WZA1 660 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 MOCOSQ96EN8 888 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 DCTN5Q9BTE1 182 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 MAF1Q9H063 256 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 MBNL1Q9NR56 388 aaKnown RBP4.45□□□□□ -1.7
PRPF39-209ENST00000556353 TMEM181Q9P2C4 612 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 HACL1Q9UJ83 578 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 RPS6KL1Q9Y6S9 549 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 UNC80Q8N2C7 3258 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 MAPK8IP3Q9UPT6 1336 aa4.45□□□□□ -1.7
PRPF39-209ENST00000556353 ZSWIM8A7E2V4 1837 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 VCANP13611 3396 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 A0A087WW49 117 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 IGHV4-61A0A0C4DH41 118 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PRR32B1ATL7 298 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 GH2P01242 217 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 IGHV4-59P01825 116 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 ZNF853P0CG23 659 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 EIF2S2P20042 333 aaKnown RBP4.44□□□□□ -1.7
PRPF39-209ENST00000556353 KRT9P35527 623 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 MRPS5P82675 430 aaKnown RBP4.44□□□□□ -1.7
PRPF39-209ENST00000556353 CCDC184Q52MB2 194 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 SLC10A5Q5PT55 438 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 RARS2Q5T160 578 aaKnown RBP4.44□□□□□ -1.7
PRPF39-209ENST00000556353 GKAP1Q5VSY0 366 aaPredicted RBP4.44□□□□□ -1.7
PRPF39-209ENST00000556353 CST9Q5W186 159 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PWWP2BQ6NUJ5 590 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 COPS6Q7L5N1 327 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 DNAJC22Q8N4W6 341 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 SNRNP27Q8WVK2 155 aaKnown RBP4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PRAC1Q96KF2 57 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 OR2A14Q96R47 310 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 TSPAN18Q96SJ8 248 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 GAD1Q99259 594 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 VGLL1Q99990 258 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 HGH1Q9BTY7 390 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 NYXQ9GZU5 481 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 DIAPH3Q9NSV4 1193 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PLCXD1Q9NUJ7 323 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 IRAK4Q9NWZ3 460 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PIAS3Q9Y6X2 628 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 CDH23Q9H251 3354 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 PRUNE2Q8WUY3 3088 aa4.44□□□□□ -1.7
PRPF39-209ENST00000556353 RBBP6Q7Z6E9 1792 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 IGHV4-4A0A075B6R2 117 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 IGLV9-49A0A0B4J1Y8 123 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 PPIP5K2O43314 1243 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 AP2A2O94973 939 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 TPOP07202 933 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 SRPRAP08240 638 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 HSPA8P11142 646 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 ALDH1B1P30837 517 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 CXCL9Q07325 125 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 AIMP1Q12904 312 aaKnown RBP4.43□□□□□ -1.7
PRPF39-209ENST00000556353 PRKAA1Q13131 559 aa4.43□□□□□ -1.7
PRPF39-209ENST00000556353 DDX10Q13206 875 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms