RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PCSK4Q6UW60 755 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 CEACAM20Q6UY09 585 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 TBC1D1Q86TI0 1168 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 VASH2Q86V25 355 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 LCA5Q86VQ0 697 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 CFAP206Q8IYR0 622 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 JPH3Q8WXH2 748 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 KLHL6Q8WZ60 621 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 NKD1Q969G9 470 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ARL8AQ96BM9 186 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 TLCD1Q96CP7 247 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 SLC41A2Q96JW4 573 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 SPRY4Q9C004 299 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 IQCGQ9H095 443 aaKnown RBP9.35□□□□□ -0.91
ACTN1-215ENST00000555616 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 SYTL2Q9HCH5 934 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 APMAPQ9HDC9 416 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 ACOT9Q9Y305 439 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 HEBP2Q9Y5Z4 205 aa9.35□□□□□ -0.91
ACTN1-215ENST00000555616 A0A096LPK6 155 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 A0A1W2PPM1 405 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 TLCD2A6NGC4 264 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 TK2O00142 265 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 COPEO14579 308 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 LIN7AO14910 233 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 POLR1CO15160 346 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PHGDHO43175 533 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 RAD1O60671 282 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 RASSF9O75901 435 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 DLGAP3O95886 979 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 COL6A2P12110 1019 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 NELFEP18615 380 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 SLC26A3P40879 764 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CCNFP41002 786 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 MAGEA12P43365 314 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PREPP48147 710 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CCT5P48643 541 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 RGS4P49798 205 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 KPNA2P52292 529 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CDKN2DP55273 166 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 SRSF6Q13247 344 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 BOP1Q14137 746 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 SYTL3Q4VX76 610 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 TTMPQ5BVD1 217 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 MANEAQ5SRI9 462 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CACHD1Q5VU97 1274 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 FAM92BQ6ZTR7 304 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CMC1Q7Z7K0 106 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 EXOC3L1Q86VI1 746 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 OOSP2Q86WS3 158 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 KMT5CQ86Y97 462 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CARFQ8N187 725 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 C4orf33Q8N1A6 199 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 ZBTB2Q8N680 514 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 ACVR1CQ8NER5 493 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 TTC9Q92623 222 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 INPP5DQ92835 1189 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 WBP1Q96G27 269 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 APOPT1Q96IL0 206 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 GPR21Q99679 349 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 OLFM1Q99784 485 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CTRCQ99895 268 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 VPS11Q9H270 941 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 MVB12BQ9H7P6 319 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 GPAMQ9HCL2 828 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 SSU72Q9NP77 194 aaKnown RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PCMTD2Q9NV79 361 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 KLHL42Q9P2K6 505 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 TMEM184BQ9Y519 407 aaPredicted RBP9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PCDHGA4Q9Y5G9 962 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 PRSS21Q9Y6M0 314 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 COLEC10Q9Y6Z7 277 aa9.34□□□□□ -0.91
ACTN1-215ENST00000555616 IGHV5-51A0A0C4DH38 117 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 GOLGA8RI6L899 631 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 MATN2O00339 956 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 IFRD1O00458 451 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-215ENST00000555616 POLR3GO15318 223 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-215ENST00000555616 GLRA3O75311 464 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 STK17BO94768 372 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 C2P06681 752 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 APOA4P06727 396 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 GSTA1P08263 222 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SLC35E2BP0CK96 405 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CBSLP0DN79 551 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 FGF5P12034 268 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 ZNF37AP17032 561 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-215ENST00000555616 PDHA2P29803 388 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 HPDP32754 393 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CBSP35520 551 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SEPHS1P49903 392 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CLCN7P51798 805 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 IL2P60568 153 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SH3BP2P78314 561 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 CBX1P83916 185 aa9.33□□□□□ -0.92
ACTN1-215ENST00000555616 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms