RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DEFB133Q30KQ1 61 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 PRAMEF9Q5VWM5 478 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 LETMD1Q6P1Q0 360 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 GPRIN3Q6ZVF9 776 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 LRRC70Q7Z2Q7 622 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 MILR1Q7Z6M3 343 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 MYLK4Q86YV6 388 aaPredicted RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 SYT12Q8IV01 421 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 C10orf67Q8IYJ2 551 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 CDYL2Q8N8U2 506 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 LINC01555Q8NAE3 123 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 ZNF548Q8NEK5 533 aaPredicted RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 ZDHHC1Q8WTX9 485 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 NUF2Q9BZD4 464 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 DNAJC11Q9NVH1 559 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 SPASTQ9UBP0 616 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 LNPEPQ9UIQ6 1025 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 SH2B3Q9UQQ2 575 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 PTGDR2Q9Y5Y4 395 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 COLEC10Q9Y6Z7 277 aa9.89□□□□□ -0.83
SRP54-208ENST00000555557 ARHGEF17Q96PE2 2063 aaPredicted RBP9.89□□□□□ -0.83
SRP54-208ENST00000555557 PRR5-ARHGAP8B1AHC4 643 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 MATN2O00339 956 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 GIPC1O14908 333 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 PIAS2O75928 621 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ESRRBO95718 433 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CFIP05156 583 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 NPPBP16860 134 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 PIK3CGP48736 1102 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ARFIP2P53365 341 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CCDC6Q16204 474 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 TCHHL1Q5QJ38 904 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 CAPN13Q6MZZ7 669 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 ZNF761Q86XN6 746 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 CLYBLQ8N0X4 340 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 OR4E2Q8NGC2 313 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SLC37A2Q8TED4 501 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ZNF382Q96SR6 550 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 TMEM120AQ9BXJ8 343 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CPNE7Q9UBL6 633 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 POLG2Q9UHN1 485 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ICKQ9UPZ9 632 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 RNF11Q9Y3C5 154 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 HEBP2Q9Y5Z4 205 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 R4GN57 208 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 GOLGA8QA0A0J9YX86 632 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 GOLGA8OA6NCC3 632 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 E7EQ34 232 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 GOLGA8NF8WBI6 632 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 AZIN1O14977 448 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CRCPO75575 148 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 OTCP00480 354 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 VIPP01282 170 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 FGF4P08620 206 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 PSMB5P28074 263 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 NAA20P61599 178 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CDC16Q13042 620 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SHBQ15464 509 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CYP2A13Q16696 494 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 UGT3A2Q3SY77 523 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SLC9B1Q4ZJI4 515 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 THEMIS2Q5TEJ8 643 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 METTL2BQ6P1Q9 378 aaKnown RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 SCIMPQ6UWF3 145 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 GKN2Q86XP6 184 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 TRIM48Q8IWZ4 208 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SLC25A45Q8N413 288 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SFRP1Q8N474 314 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SH3KBP1Q96B97 665 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ELF4Q99607 663 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 SGPP1Q9BX95 441 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SMOC1Q9H4F8 434 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 WDR55Q9H6Y2 383 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 KIR3DX1Q9H7L2 352 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 SLC40A1Q9NP59 571 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 CCDC177Q9NQR7 707 aaPredicted RBP9.88□□□□□ -0.83
SRP54-208ENST00000555557 SUSD2Q9UGT4 822 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 BTRCQ9Y297 605 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 PCDHGA2Q9Y5H1 932 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 DNAJC15Q9Y5T4 150 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 FANCMQ8IYD8 2048 aa9.88□□□□□ -0.83
SRP54-208ENST00000555557 ZNF318Q5VUA4 2279 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 A0A1W2PPV9 198 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 FFAR3O14843 346 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 HDAC3O15379 428 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 GPR42O15529 346 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
SRP54-208ENST00000555557 DIAPH2O60879 1101 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 SNUPNO95149 360 aaKnown RBP9.87□□□□□ -0.83
SRP54-208ENST00000555557 CAPN1P07384 714 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 ERGP11308 486 aa9.87□□□□□ -0.83
SRP54-208ENST00000555557 XRCC1P18887 633 aaPredicted RBP9.87□□□□□ -0.83
SRP54-208ENST00000555557 PKLRP30613 574 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms