RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 INTS10Q9NVR2 710 aaKnown RBP23.52■■□□□ 1.36
PRKCH-216ENST00000555542 G3BP2Q9UN86 482 aaKnown RBP23.52■■□□□ 1.36
PRKCH-216ENST00000555542 CTSBP07858 339 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 PKMP14618 531 aaKnown RBP23.51■■□□□ 1.35
PRKCH-216ENST00000555542 ALAS2P22557 587 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 OTX2P32243 289 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 FNTAP49354 379 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 PGDP52209 483 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 ADARP55265 1226 aaKnown RBP23.51■■□□□ 1.35
PRKCH-216ENST00000555542 SLC9A5Q14940 896 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 CCSMST1Q4G0I0 132 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 ZC3H12BQ5HYM0 836 aaKnown RBP23.51■■□□□ 1.35
PRKCH-216ENST00000555542 ZNF385CQ66K41 422 aaPredicted RBP23.51■■□□□ 1.35
PRKCH-216ENST00000555542 CENPUQ71F23 418 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 MCATQ8IVS2 390 aaKnown RBP23.51■■□□□ 1.35
PRKCH-216ENST00000555542 ADAMTS17Q8TE56 1095 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 DLG3Q92796 817 aa23.51■■□□□ 1.35
PRKCH-216ENST00000555542 KRT87PA6NCN2 255 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 H3BMH7 237 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 ATP5DP30049 168 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 FOLR3P41439 243 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 GRIA3P42263 894 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 FIGLAQ6QHK4 219 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 GBP5Q96PP8 586 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 MIPEPQ99797 713 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 C20orf96Q9NUD7 363 aaPredicted RBP23.5■■□□□ 1.35
PRKCH-216ENST00000555542 SNX12Q9UMY4 172 aa23.5■■□□□ 1.35
PRKCH-216ENST00000555542 PTRH2Q9Y3E5 179 aaKnown RBP23.5■■□□□ 1.35
PRKCH-216ENST00000555542 ZNF185O15231 689 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 USP1O94782 785 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 FKBP9O95302 570 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 CD63P08962 238 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 PSMB5P28074 263 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 RRADP55042 308 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 TTLL9Q3SXZ7 439 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 PPIL6Q8IXY8 311 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 DENND1AQ8TEH3 1009 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 FBXO6Q9NRD1 293 aaPredicted RBP23.49■■□□□ 1.35
PRKCH-216ENST00000555542 SPATA7Q9P0W8 599 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 ASIC3Q9UHC3 531 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 NEU2Q9Y3R4 380 aa23.49■■□□□ 1.35
PRKCH-216ENST00000555542 F7P08709 466 aaPredicted RBP23.48■■□□□ 1.35
PRKCH-216ENST00000555542 ARSFP54793 590 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 CTBP1Q13363 440 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 TSTA3Q13630 321 aaPredicted RBP23.48■■□□□ 1.35
PRKCH-216ENST00000555542 ATP1A4Q13733 1029 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 LONRF1Q17RB8 773 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 KLHL38Q2WGJ6 581 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 NKAIN1Q4KMZ8 207 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 ACSBG2Q5FVE4 666 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 FCRL6Q6DN72 434 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 TTLL10Q6ZVT0 673 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 MED25Q71SY5 747 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 DENND6AQ8IWF6 608 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 NAT8LQ8N9F0 302 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 TTC29Q8NA56 475 aaPredicted RBP23.48■■□□□ 1.35
PRKCH-216ENST00000555542 CALML6Q8TD86 181 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 ANP32BQ92688 251 aaKnown RBP23.48■■□□□ 1.35
PRKCH-216ENST00000555542 SELENOSQ9BQE4 189 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 FAM114A2Q9NRY5 505 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 GALPQ9UBC7 116 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 FAM169AQ9Y6X4 670 aa23.48■■□□□ 1.35
PRKCH-216ENST00000555542 TNRC6AQ8NDV7 1962 aaKnown RBP23.48■■□□□ 1.35
PRKCH-216ENST00000555542 CES2O00748 559 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 MATN4O95460 622 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 CATP04040 527 aaKnown RBP23.47■■□□□ 1.35
PRKCH-216ENST00000555542 PDGFAP04085 211 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 TCTE1Q5JU00 501 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 TMEM102Q8N9M5 508 aaPredicted RBP23.47■■□□□ 1.35
PRKCH-216ENST00000555542 ZUFSPQ96AP4 578 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 KCNF1Q9H3M0 494 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 PCDHGA9Q9Y5G4 932 aaKnown RBP23.47■■□□□ 1.35
PRKCH-216ENST00000555542 FER1L5A0AVI2 2057 aa23.47■■□□□ 1.35
PRKCH-216ENST00000555542 ZCWPW2A0A1B0GU75 182 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 A6NL46 340 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 TARM1B6A8C7 271 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 PEX12O00623 359 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 SLC1A2P43004 574 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 GBX1Q14549 363 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 SSPNQ14714 243 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 GRM7Q14831 915 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 LMNTD2Q8IXW0 634 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.46■■□□□ 1.35
PRKCH-216ENST00000555542 OR2L3Q8NG85 312 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 OR9A1PQ8NGU1 263 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 HMGCLL1Q8TB92 370 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 ACAT2Q9BWD1 397 aa23.46■■□□□ 1.35
PRKCH-216ENST00000555542 DDX47Q9H0S4 455 aaKnown RBP23.46■■□□□ 1.35
PRKCH-216ENST00000555542 SEC16AO15027 2179 aa23.45■■□□□ 1.35
PRKCH-216ENST00000555542 A0A1B0GX78 115 aa23.45■■□□□ 1.34
PRKCH-216ENST00000555542 ARHGEF33A8MVX0 844 aa23.45■■□□□ 1.34
PRKCH-216ENST00000555542 PRICKLE3O43900 615 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-216ENST00000555542 KLF7O75840 302 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-216ENST00000555542 PIM1P11309 404 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-216ENST00000555542 TCP1P17987 556 aaKnown RBP23.45■■□□□ 1.34
PRKCH-216ENST00000555542 MCM3P25205 808 aa23.45■■□□□ 1.34
PRKCH-216ENST00000555542 CMPK1P30085 196 aa23.45■■□□□ 1.34
PRKCH-216ENST00000555542 RPA3P35244 121 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-216ENST00000555542 MAGEA3P43357 314 aa23.45■■□□□ 1.34
PRKCH-216ENST00000555542 CLCN7P51798 805 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms