RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 AKIRIN1Q9H9L7 192 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 FAM60AQ9NP50 221 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 FAM114A2Q9NRY5 505 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 ABCF3Q9NUQ8 709 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 TRMT6Q9UJA5 497 aaKnown RBP10.28□□□□□ -0.76
SHMT2-213ENST00000554600 COMMD10Q9Y6G5 202 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CFAP46Q8IYW2 2715 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 CNTRLQ7Z7A1 2325 aa10.28□□□□□ -0.76
SHMT2-213ENST00000554600 RP1L1Q8IWN7 2480 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ARHGEF33A8MVX0 844 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 C21orf140B9A014 251 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF749O43361 778 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MATN4O95460 622 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 HBQ1P09105 142 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ENO3P13929 434 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MCM3P25205 808 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 PSMB5P28074 263 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 OAS2P29728 719 aaKnown RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 CCR10P46092 362 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 RPL21P46778 160 aaKnown RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 CLCN7P51798 805 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 RPS18P62269 152 aaKnown RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 GBX1Q14549 363 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 PTCHD3Q3KNS1 767 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 LINC00303Q3SY05 128 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 UGT3A1Q6NUS8 523 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 FIGLAQ6QHK4 219 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MAATS1Q7Z4T9 603 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SPNS2Q8IVW8 549 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 CPNE9Q8IYJ1 553 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF655Q8N720 491 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SLC38A9Q8NBW4 561 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 C2CD4AQ8NCU7 369 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 BBOF1Q8ND07 529 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SPATA4Q8NEY3 305 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 OR9A1PQ8NGU1 263 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 GIMAP7Q8NHV1 300 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 FLVCR1-AS1Q8TAF5 88 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 KCNJ9Q92806 393 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MED8Q96G25 268 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 C16orf45Q96MC5 204 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 RUFY1Q96T51 708 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MIPEPQ99797 713 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 AARSD1Q9BTE6 412 aaKnown RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 MENTQ9BUN1 341 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ACAT2Q9BWD1 397 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SPRTNQ9H040 489 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-213ENST00000554600 CHST8Q9H2A9 424 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 ACTL8Q9H568 366 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 TXLNGQ9NUQ3 528 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SPATA7Q9P0W8 599 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 SLC17A6Q9P2U8 582 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 PLCL2Q9UPR0 1127 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 DHRS7Q9Y394 339 aa10.27□□□□□ -0.77
SHMT2-213ENST00000554600 NBASA2RRP1 2371 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 C9J4A7 227 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 MEN1O00255 615 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 RAD51CO43502 376 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 HCRTR1O43613 425 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 PSIP1O75475 530 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 CREG1O75629 220 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 MSL3P1P0C860 447 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 MPC1LP0DKB6 136 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 AGXTP21549 392 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 RPA3P35244 121 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 GRIA3P42263 894 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 RGS4P49798 205 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 RBM20Q5T481 1227 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 C1orf189Q5VU69 101 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 TRMT10BQ6PF06 316 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 CAPN12Q6ZSI9 719 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 NEK10Q6ZWH5 1172 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 PIWIL4Q7Z3Z4 852 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 PALM2Q8IXS6 379 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 SYTL1Q8IYJ3 562 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 ZBED8Q8IZ13 594 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 DSELQ8IZU8 1212 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 EXD3Q8N9H8 876 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 FBXO36Q8NEA4 188 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 CD200R1Q8TD46 325 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 DENND1AQ8TEH3 1009 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 LRRC39Q96DD0 335 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 PKP4Q99569 1192 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 ERP44Q9BS26 406 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 NDC1Q9BTX1 674 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 SEMA4CQ9C0C4 833 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 TAS2R13Q9NYV9 303 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 ZFATQ9P243 1243 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 NDOR1Q9UHB4 597 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 SNX7Q9UNH6 387 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 POLHQ9Y253 713 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 FARSAQ9Y285 508 aaKnown RBP10.26□□□□□ -0.77
SHMT2-213ENST00000554600 TEX264Q9Y6I9 313 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 AP1M2Q9Y6Q5 423 aa10.26□□□□□ -0.77
SHMT2-213ENST00000554600 PABPN1LA6NDY0 278 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF839A8K0R7 811 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms