RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 VOPP1Q96AW1 172 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 RTP4Q96DX8 246 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 DCLRE1CQ96SD1 692 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 MESP1Q9BRJ9 268 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 WRAP53Q9BUR4 548 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TM6SF2Q9BZW4 377 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ZYG11BQ9C0D3 744 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TTYH3Q9C0H2 523 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 RETREG1Q9H6L5 497 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PPCSQ9HAB8 311 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SERHLQ9NQF3 203 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 FBXO8Q9NRD0 319 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 SPATS2LQ9NUQ6 558 aaKnown RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 PDP2Q9P2J9 529 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ARMCX3Q9UH62 379 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 ITGB1BP2Q9UKP3 347 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CFAP45Q9UL16 551 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 HPCAL4Q9UM19 191 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 CNTN6Q9UQ52 1028 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 LRCH1Q9Y2L9 728 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM184BQ9Y519 407 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-228ENST00000554592 OR1A2Q9Y585 309 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
ATXN3-228ENST00000554592 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TEP1Q99973 2627 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 IGHV1OR21-1A0A087WYE8 117 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 A0A087X1B8 175 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 A0A1B0GVL5 298 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 P4HA2O15460 535 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 RASSF9O75901 435 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 SUN1O94901 812 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 CLDN1O95832 211 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 THRAP10827 490 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 KRT5P13647 590 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 CCNB1P14635 433 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 CMA1P23946 247 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 EEF1GP26641 437 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TRIM23P36406 574 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 FMO5P49326 533 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF134P52741 427 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 WNT3P56703 355 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 KIAA1024LP59773 190 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 RAPGEF1Q13905 1077 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 IQCB1Q15051 598 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 INPP5JQ15735 1006 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 UGP2Q16851 508 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 KRTAP21-3Q3LHN1 58 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TUBB8Q3ZCM7 444 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 KCTD16Q68DU8 428 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 FOXR2Q6PJQ5 311 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 ARHGAP22Q7Z5H3 698 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MRGPRGQ86SM5 289 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 GAS2L3Q86XJ1 694 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 VRK3Q8IV63 474 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 APLFQ8IW19 511 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TXLNBQ8N3L3 684 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 WDTC1Q8N5D0 677 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 BMPERQ8N8U9 685 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 CCL4L1Q8NHW4 92 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 FUBP1Q96AE4 644 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 HMCESQ96FZ2 354 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 PDXPQ96GD0 296 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TMEM41AQ96HV5 264 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 GDAP1L1Q96MZ0 367 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 NPY6RQ99463 290 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TSG101Q99816 390 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 GSDMCQ9BYG8 508 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 SLC29A3Q9BZD2 475 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 FGF22Q9HCT0 170 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MRPL40Q9NQ50 206 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 PIGVQ9NUD9 493 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TBC1D23Q9NUY8 699 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 TRNAU1APQ9NX07 287 aaKnown RBP4.81□□□□□ -1.64
ATXN3-228ENST00000554592 ZNF212Q9UDV6 495 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MOSPD1Q9UJG1 213 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MID2Q9UJV3 735 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 KCND3Q9UK17 655 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 STAP1Q9ULZ2 295 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 SNX10Q9Y5X0 201 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 RPS6KL1Q9Y6S9 549 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 FLNCQ14315 2725 aa4.81□□□□□ -1.64
ATXN3-228ENST00000554592 MYH10P35580 1976 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ICE1Q9Y2F5 2266 aa4.8□□□□□ -1.64
ATXN3-228ENST00000554592 ABCA12Q86UK0 2595 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms