RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 DCTN3O75935 186 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 OR7A10O76100 309 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GCNT3O95395 438 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZBTB11O95625 1053 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 KRT8P05787 483 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PLEKP08567 350 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CYP21A2P08686 494 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SERPINF2P08697 491 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ACAA1P09110 424 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ELFN1P0C7U0 828 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ARP10275 920 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FCER1AP12319 257 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SRCP12931 536 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ENO3P13929 434 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CCNB1P14635 433 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ETS2P15036 469 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TCP1P17987 556 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GALP22466 123 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PTBP1P26599 531 aaKnown RBP eCLIP4.33□□□□□ -1.724e-18■■■■■ 40.6
ATXN3-227ENST00000554491 PDIA3P30101 505 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MAT2AP31153 395 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 RFC2P35250 354 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FOLR3P41439 243 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 RECQLP46063 649 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GPR3P46089 330 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SLCO1A2P46721 670 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 NPTX2P47972 431 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SUCLG1P53597 346 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 C21orf59P57076 290 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ACTR1AP61163 376 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 KCNJ2P63252 427 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 POU6F2P78424 691 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 XIAPP98170 497 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CDR2Q01850 454 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 UBE3AQ05086 875 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SPP2Q13103 211 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MTM1Q13496 603 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 DDX39BQ13838 428 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GCKRQ14397 625 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 STAT4Q14765 748 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 STX1AQ16623 288 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MCMDC2Q4G0Z9 681 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FAM98BQ52LJ0 330 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ESCO2Q56NI9 601 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 STXBP5Q5T5C0 1151 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 C1orf185Q5T7R7 199 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 LIN9Q5TKA1 542 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GARNL3Q5VVW2 1013 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 KIAA0895LQ68EN5 471 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SLC30A6Q6NXT4 461 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 XRRA1Q6P2D8 792 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CASC4Q6P4E1 433 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 RTL4Q6ZR62 310 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 RFX8Q6ZV50 586 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 NEK8Q86SG6 692 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TTC7BQ86TV6 843 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 LHFPL3Q86UP9 236 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF589Q86UQ0 364 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PSTKQ8IV42 348 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 NELFCDQ8IXH7 590 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MAML2Q8IZL2 1156 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MREGQ8N565 214 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FITM2Q8N6M3 262 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CNTD1Q8N815 330 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ASCC1Q8N9N2 400 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FSIP1Q8NA03 581 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CATSPER1Q8NEC5 780 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MCPH1Q8NEM0 835 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 OR4D10Q8NGI6 311 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MOSPD2Q8NHP6 518 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TBC1D15Q8TC07 691 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 POF1BQ8WVV4 589 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 KBTBD7Q8WVZ9 684 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ARNTL2Q8WYA1 636 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GTF3AQ92664 365 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 DPF1Q92782 380 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 YIPF5Q969M3 257 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF566Q969W8 418 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PBKQ96KB5 322 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 FAM84BQ96KN1 310 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SGCZQ96LD1 299 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 LRGUKQ96M69 825 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TWNKQ96RR1 684 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF184Q99676 751 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ADI1Q9BV57 179 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 OR51V1Q9H2C8 321 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TP63Q9H3D4 680 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 HIPK3Q9H422 1215 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SLA2Q9H6Q3 261 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 SARS2Q9NP81 518 aaKnown RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 XPNPEP3Q9NQH7 507 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF275Q9NSD4 429 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-227ENST00000554491 GIMAP4Q9NUV9 329 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 CMTM6Q9NX76 183 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 ZDHHC7Q9NXF8 308 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 MTMR4Q9NYA4 1195 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
ATXN3-227ENST00000554491 TRMT6Q9UJA5 497 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms