RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 A0A1W2PN81 502 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 EDIL3O43854 480 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ZG16O60844 167 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 RNASEH1O60930 286 aaKnown RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 TBX10O75333 385 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 PAK4O96013 591 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 NGFP01138 241 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 TPM2P07951 284 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 DANCRP0C864 163 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 EFNA1P20827 205 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 CHRNA7P36544 502 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 MTHFRP42898 656 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF41P51814 821 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 PPP5CP53041 499 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 PRKCZQ05513 592 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ALCAMQ13740 583 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 TMEM30BQ3MIR4 351 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 PHLDA2Q53GA4 152 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ARHGEF16Q5VV41 709 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ADAM5Q6NVV9 412 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ALKBH5Q6P6C2 394 aaKnown RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 DCLRE1AQ6PJP8 1040 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 TMEM139Q8IV31 216 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 IWS1Q96ST2 819 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 PI4K2AQ9BTU6 479 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 LAT2Q9GZY6 243 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 NOL11Q9H8H0 719 aaKnown RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ANKZF1Q9H8Y5 726 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 IL17BQ9UHF5 180 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 XPO7Q9UIA9 1087 aaKnown RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-211ENST00000554437 AGTPBP1Q9UPW5 1226 aa4.58□□□□□ -1.68
SCFD1-211ENST00000554437 ABCC9O60706 1549 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 LOC101059948A0A1B0GTJ6 334 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 EDDM13A0A1B0GTR0 161 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 TRBC2A0A5B9 178 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF197O14709 1029 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ATP6V0E1O15342 81 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CLPTM1O96005 669 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 SLC4A1P02730 911 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 EDN1P05305 212 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 P4HA1P13674 534 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 IFNAR1P17181 557 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CA4P22748 312 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PTPN3P26045 913 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ALDH3A2P51648 485 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 NR0B1P51843 470 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 HNRNPKP61978 463 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 GNB1P62873 340 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 GTDC1Q4AE62 458 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PARP10Q53GL7 1025 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ELFN2Q5R3F8 820 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 SHQ1Q6PI26 577 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PLPPR4Q7Z2D5 763 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 TMPRSS11BQ86T26 416 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CDK20Q8IZL9 346 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CCAR2Q8N163 923 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 MAPKAPK5-AS1Q8N8E1 139 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 NPEPL1Q8NDH3 523 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 KBTBD8Q8NFY9 601 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 SSMEM1Q8WWF3 244 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 SYN2Q92777 582 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CENPTQ96BT3 561 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 DHX58Q96C10 678 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 GBP5Q96PP8 586 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 LITAFQ99732 161 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 NUP85Q9BW27 656 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 RBM4Q9BWF3 364 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 BARHL1Q9BZE3 327 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 DNAI2Q9GZS0 605 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CNOT10Q9H9A5 744 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PIH1D3Q9NQM4 214 aaKnown RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF701Q9NV72 531 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PRMT7Q9NVM4 692 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 FLRT3Q9NZU0 649 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 CACNG4Q9UBN1 327 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 LRWD1Q9UFC0 647 aa4.57□□□□□ -1.68
SCFD1-211ENST00000554437 MTF2Q9Y483 593 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-211ENST00000554437 PCDH11YQ9BZA8 1340 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 IGHV4-61A0A0C4DH41 118 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 ANKRD61A6NGH8 418 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 IGHV4-59P01825 116 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 SMIM18P0DKX4 95 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 HSPA8P11142 646 aaKnown RBP4.56□□□□□ -1.68
SCFD1-211ENST00000554437 GNB3P16520 340 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 CD86P42081 329 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 ATP12AP54707 1039 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 HSD17B7P56937 341 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 EVCP57679 992 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 CDR2Q01850 454 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 GPR17Q13304 367 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 PPIGQ13427 754 aaKnown RBP eCLIP4.56□□□□□ -1.683e-8■□□□□ 8.9
SCFD1-211ENST00000554437 RRS1Q15050 365 aaKnown RBP4.56□□□□□ -1.68
SCFD1-211ENST00000554437 E2F5Q15329 346 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 KIF26BQ2KJY2 2108 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 MRGPRG-AS1Q2M3A8 158 aa4.56□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF674Q2M3X9 581 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms