RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CDCP2Q5VXM1 449 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GRAMD4Q6IC98 578 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 OVOS1Q6IE37 1185 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SLFN12LQ6IEE8 588 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 OR6B2Q6IFH4 312 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 DPY19L2P1Q6NXN4 242 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC137Q6PK04 289 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 Q6ZS52 159 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ANKS1BQ7Z6G8 1248 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 FAM86B1Q8N7N1 296 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ENDOVQ8N8Q3 282 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ATAD1Q8NBU5 361 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 NOA1Q8NC60 698 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 C11orf65Q8NCR3 313 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 C17orf47Q8NEP4 570 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TRPV3Q8NET8 790 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SLC24A4Q8NFF2 622 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 OR10T2Q8NGX3 314 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RAB3IL1Q8TBN0 382 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RNASE8Q8TDE3 154 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SLC20A1Q8WUM9 679 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CAPSLQ8WWF8 208 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 LZICQ8WZA0 190 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 POMGNT1Q8WZA1 660 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 FOXJ1Q92949 421 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 KAT5Q92993 513 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RAD51AP1Q96B01 352 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 REXO5Q96IC2 774 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 MAGED4Q96JG8 741 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 NSMCE2Q96MF7 247 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ANKRD27Q96NW4 1050 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PNMA5Q96PV4 448 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PANX1Q96RD7 426 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PNKPQ96T60 521 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CCM2Q9BSQ5 444 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 HEMGNQ9BXL5 484 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ZDHHC5Q9C0B5 715 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 YIPF3Q9GZM5 350 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GBA3Q9H227 469 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 VCX2Q9H322 139 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RUBCNLQ9H714 662 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ECT2Q9H8V3 914 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TRIM45Q9H8W5 580 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CHODLQ9H9P2 273 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM9BQ9NQ34 198 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ABCB8Q9NUT2 735 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 DDX19AQ9NUU7 478 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 OXSMQ9NWU1 459 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 FAM120CQ9NX05 1096 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CLEC5AQ9NY25 188 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 ABI2Q9NYB9 513 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 TAS2R7Q9NYW3 318 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CRNNQ9UBG3 495 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 SUSD2Q9UGT4 822 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CYB5R1Q9UHQ9 305 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 PILRBQ9UKJ0 227 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 FZD10Q9ULW2 581 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GUCA1BQ9UMX6 200 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 NDRG2Q9UN36 371 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 GDAQ9Y2T3 454 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 HEY1Q9Y5J3 304 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 CEP250Q9BV73 2442 aa2.65□□□□□ -1.98
PRPF39-206ENST00000554429 RIF1Q5UIP0 2472 aaKnown RBP2.65□□□□□ -1.98
PRPF39-206ENST00000554429 COL27A1Q8IZC6 1860 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 FAM237AA0A1B0GTK4 181 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 EDDM13A0A1B0GTR0 161 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 A0A1W2PP55 124 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 K7EQS6 105 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 GFRA2O00451 464 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SLC9A3R1O14745 358 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF185O15231 689 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SLC16A6O15403 523 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF821O75541 412 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 FAM155BO75949 473 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 EGFP01133 1207 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SPARCP09486 303 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 CCDC130P13994 396 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 CD72P21854 359 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 HNRNPH1P31943 449 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 IFNA8P32881 189 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 GJA4P35212 333 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 OPRD1P41143 372 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PAFAH1B1P43034 410 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TOB1P50616 345 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 GALK1P51570 392 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SUMO3P55854 103 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 EIF3BP55884 814 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 BPIFB4P59827 614 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ETF1P62495 437 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 PDCLQ13371 301 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ENPP2Q13822 863 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SPIDRQ14159 915 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SF3A2Q15428 464 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 IL17AQ16552 155 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ATAD3BQ5T9A4 648 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 ZDHHC20Q5W0Z9 365 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 RNF43Q68DV7 783 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM214Q6NUQ4 689 aaKnown RBP2.65□□□□□ -1.99
PRPF39-206ENST00000554429 SLC39A4Q6P5W5 647 aa2.65□□□□□ -1.99
PRPF39-206ENST00000554429 VSTM1Q6UX27 236 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms