RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PCTPQ9UKL6 214 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 ICKQ9UPZ9 632 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 DYRK1BQ9Y463 629 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 ARID1BQ8NFD5 2236 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 E7ENX8 843 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 PROB1E7EW31 1015 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 E2F3O00716 465 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-210ENST00000553950 HSPA4LO95757 839 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 OTCP00480 354 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 GLB1P16278 677 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 BGNP21810 368 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 PKNOX1P55347 436 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
SHMT2-210ENST00000553950 TAP2Q03519 686 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 CDC16Q13042 620 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 NAE1Q13564 534 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 GTF2H2Q13888 395 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 KIR2DS3Q14952 304 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 CCSMST1Q4G0I0 132 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 THEMIS2Q5TEJ8 643 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 ARMC6Q6NXE6 501 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 GTF2H2CQ6P1K8 395 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 LCTLQ6UWM7 567 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF438Q7Z4V0 828 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 SPNS2Q8IVW8 549 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 SNX31Q8N9S9 440 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 PATE1Q8WXA2 126 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 MENTQ9BUN1 341 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 GATA5Q9BWX5 397 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-210ENST00000553950 DRC3Q9H069 523 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 IL21RQ9HBE5 538 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 FSCN3Q9NQT6 498 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 SEMA4GQ9NTN9 838 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 PCDHB11Q9Y5F2 797 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 KCNE2Q9Y6J6 123 aa14.05□□□□□ -0.16
SHMT2-210ENST00000553950 MUC6Q6W4X9 2439 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 SRRM3A6NNA2 597 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 C2orf74A8MZ97 194 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 CLGNO14967 610 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 TAPBPO15533 448 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 UGDHO60701 494 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 SIX3O95343 332 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GIMD1P0DJR0 217 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GNAZP19086 355 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 HRH2P25021 359 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 ABCE1P61221 599 aaKnown RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GPLD1P80108 840 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 ABATP80404 500 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GUCY1A3Q02108 690 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 CLCQ05315 142 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 NR1D2Q14995 579 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 CCDC6Q16204 474 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 RBBP7Q16576 425 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 AASDHQ4L235 1098 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 EFL1Q7Z2Z2 1120 aaKnown RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GOLGA7Q7Z5G4 137 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 THOC6Q86W42 341 aaKnown RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 SLC35F3Q8IY50 421 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF75CPQ92670 426 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 C7orf26Q96N11 449 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF382Q96SR6 550 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 SMOC1Q9H4F8 434 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 GSTO2Q9H4Y5 243 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 PLAGL1Q9UM63 463 aa14.04□□□□□ -0.16
SHMT2-210ENST00000553950 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.04□□□□□ -0.16
SHMT2-210ENST00000553950 OTOGLQ3ZCN5 2332 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 PIPSLA2A3N6 862 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 DUX1O43812 170 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ENO1P06733 434 aaKnown RBP14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ARL1P40616 181 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-210ENST00000553950 CAPZBP47756 277 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 SLC1A6P48664 564 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 AGTR2P50052 363 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 CCNG1P51959 295 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 GNGT1P63211 74 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 DAB2P98082 770 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 SPEM2Q0P670 501 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 BST1Q10588 318 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 TSTA3Q13630 321 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-210ENST00000553950 UNC50Q53HI1 259 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 C10orf62Q5T681 223 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-210ENST00000553950 PRR23CQ6ZRP0 262 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ZCCHC23Q6ZST2 131 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 C17orf64Q86WR6 236 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 CRLF3Q8IUI8 442 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 CARFQ8N187 725 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 TEX9Q8N6V9 391 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 OR10G6Q8NH81 332 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ATP6V1E2Q96A05 226 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 GRAMD1AQ96CP6 724 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 FAR2Q96K12 515 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 IL17FQ96PD4 163 aa14.03□□□□□ -0.16
SHMT2-210ENST00000553950 ZMYND15Q9H091 742 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms