RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TMC5Q6UXY8 1006 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 FKBP9P1Q75LS8 142 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 P2RY8Q86VZ1 359 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 OR52B6Q8NGF0 335 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 AUTS2Q8WXX7 1259 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 ALG14Q96F25 216 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 NSMCE2Q96MF7 247 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 CDK15Q96Q40 435 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 P2RY12Q9H244 342 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 SARS2Q9NP81 518 aaKnown RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 AASDHPPTQ9NRN7 309 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 EIF3LQ9Y262 564 aaKnown RBP11.96□□□□□ -0.49
SHMT2-207ENST00000553837 PCDHB9Q9Y5E1 797 aa11.96□□□□□ -0.49
SHMT2-207ENST00000553837 FADS2P1A8MWK0 482 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 B8ZZF3 427 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 H0Y626 953 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 SLC1A7O00341 560 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 E2F3O00716 465 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 STX16O14662 325 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 VPS26AO75436 327 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 CCNKO75909 580 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TRIM16O95361 564 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 RAP2AP10114 183 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TCF3P15923 654 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 CES1P23141 567 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 IL12AP29459 219 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 GKP32189 559 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TTPAP49638 278 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 KCNK10P57789 538 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 LSM3P62310 102 aaKnown RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TWF1Q12792 350 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 CTU2Q2VPK5 515 aaKnown RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 FAM98BQ52LJ0 330 aaKnown RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 XKR7Q5GH72 579 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 NKAPQ8N5F7 415 aaKnown RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 NAT16Q8N8M0 369 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 NUDT8Q8WV74 236 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TP53INP1Q96A56 240 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 VWCEQ96DN2 955 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 SNX18Q96RF0 628 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 ADGRE3Q9BY15 652 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 B3GNT4Q9C0J1 378 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF334Q9HCZ1 680 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 IL17CQ9P0M4 197 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 TRMT6Q9UJA5 497 aaKnown RBP11.96□□□□□ -0.5
SHMT2-207ENST00000553837 V9GYQ6 96 aa11.96□□□□□ -0.5
SHMT2-207ENST00000553837 MN1Q10571 1320 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 GFRA2O00451 464 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 GAPDHSO14556 408 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SMAD6O43541 496 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 OR4F21O95013 312 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PRKCAP17252 672 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 AGXTP21549 392 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CSKP41240 450 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ATN1P54259 1190 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 P2RX3P56373 397 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ERVPABLB-1P60509 514 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 IL2P60568 153 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 UFM1P61960 85 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SMAD3P84022 425 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PAGE3Q5JUK9 113 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CATSPEREQ5SY80 951 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 GLYATQ6IB77 296 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 DNAJB7Q7Z6W7 309 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 GPSM1Q86YR5 675 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CCDC103Q8IW40 242 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SLC38A6Q8IZM9 456 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 APCDD1Q8J025 514 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ASCC1Q8N9N2 400 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 TTC16Q8NEE8 873 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 LKAAEAR1Q8TD35 194 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MBOAT4Q96T53 435 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 BOCQ9BWV1 1114 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SLIRPQ9GZT3 109 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PAK1IP1Q9NWT1 392 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SLAMF8Q9P0V8 285 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SLCO3A1Q9UIG8 710 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MAGEL2Q9UJ55 1249 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 STOML2Q9UJZ1 356 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ZFC3H1O60293 1989 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ZSCAN5BA6NJL1 495 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ZBBXA8MT70 800 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 EVPLLA8MZ36 301 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 H7C0S8 307 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 NRG2O14511 850 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 TSPAN9O75954 239 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CXCL10P02778 98 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 HRH2P25021 359 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ACVR2AP27037 513 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 SOX11P35716 441 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MTHFRP42898 656 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 RHOAP61586 193 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CHRNB3Q05901 458 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 RBBP7Q16576 425 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PLA2G4EQ3MJ16 856 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 RAVER1Q8IY67 606 aaKnown RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ARL14EPQ8N8R7 260 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms