RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CTU2Q2VPK5 515 aaKnown RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 DCAF10Q5QP82 559 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 CYP4A22Q5TCH4 519 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 SUSD4Q5VX71 490 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 TXNRD3NBQ6F5E7 133 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 IL17RELQ6ZVW7 336 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 METTL27Q8N6F8 245 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 MAPKAPK5-AS1Q8N8E1 139 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 FIBINQ8TAL6 211 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 PROX1Q92786 737 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 EXOC4Q96A65 974 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 THOC1Q96FV9 657 aaKnown RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 FAM71F1Q96KD3 344 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-210ENST00000553455 PSD2Q9BQI7 771 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 ZFP57Q9NU63 452 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 DONSONQ9NYP3 566 aa4.76□□□□□ -1.65
SYNE2-210ENST00000553455 A0A0U1RQK1 487 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 A0A1W2PN81 502 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF320A2RRD8 509 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 SLC30A4O14863 429 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 IFIT3O14879 490 aaKnown RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 SLC22A2O15244 555 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 MOCS3O95396 460 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 VIMP08670 466 aaKnown RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 F7P08709 466 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 IRF2P14316 349 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 LBPP18428 481 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 CHRNA7P36544 502 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 RGS7P49802 495 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 MTCP1P56278 107 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 TAF10Q12962 218 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 SLMAPQ14BN4 828 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 TAZQ16635 292 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 PTGISQ16647 500 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 CDO1Q16878 200 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 ODF4Q2M2E3 257 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 TECRLQ5HYJ1 363 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 CCNYL2Q5T2Q4 361 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 NOTUMQ6P988 496 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 SLC27A1Q6PCB7 646 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 RASGEF1AQ8N9B8 481 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 NHLRC2Q8NBF2 726 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 ATAD1Q8NBU5 361 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 DMBX1Q8NFW5 382 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 DNASE1L2Q92874 299 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 UPF2Q9HAU5 1272 aaKnown RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 SDR39U1Q9NRG7 319 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-210ENST00000553455 ERAP1Q9NZ08 941 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 COQ3Q9NZJ6 369 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 CACNG4Q9UBN1 327 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 CDH7Q9ULB5 785 aa4.75□□□□□ -1.65
SYNE2-210ENST00000553455 IGSF1Q8N6C5 1336 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 TRAV24A0A0B4J272 114 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 LOC101059948A0A1B0GTJ6 334 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 STX6O43752 255 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 SELENOFO60613 162 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 FCGR3BO75015 233 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 PIGNO95427 931 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 IGHV4-38-2P0DP08 117 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 LIFP15018 202 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 PSMB4P28070 264 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 HSD17B3P37058 310 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 ALDH3A2P51648 485 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 MFAP3P55082 362 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 YWHAHQ04917 246 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-210ENST00000553455 TWISTNBQ3B726 338 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-210ENST00000553455 LRRC73Q5JTD7 316 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 NRARPQ7Z6K4 114 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 RTN4RL2Q86UN3 420 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 IQCA1Q86XH1 822 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 DNAJC22Q8N4W6 341 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 KLHDC9Q8NEP7 349 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 OR4K1Q8NGD4 311 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 OR10Q1Q8NGQ4 319 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 PHLDA1Q8WV24 401 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-210ENST00000553455 TRMT61BQ9BVS5 477 aaKnown RBP4.74□□□□□ -1.65
SYNE2-210ENST00000553455 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-210ENST00000553455 TXNDC16Q9P2K2 825 aa4.74□□□□□ -1.65
SYNE2-210ENST00000553455 SMCHD1A6NHR9 2005 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ARPC2O15144 300 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ST8SIA3O43173 380 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 PRAF2O60831 178 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 PGLSO95336 258 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 FRMD6-AS1P0C7T7 363 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 SPP1P10451 314 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 PAX1P15863 534 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 EFNA1P20827 205 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 SP100P23497 879 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 NKX2-1P43699 371 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 RPL21P46778 160 aaKnown RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 KCNJ1P48048 391 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 GAS1P54826 345 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 DLX5P56178 289 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 KRTAP10-11P60412 298 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ZRSR1Q15695 479 aaKnown RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ZNF672Q499Z4 452 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD20A4Q4UJ75 823 aa4.73□□□□□ -1.65
SYNE2-210ENST00000553455 ANKRD20A8PQ5CZ79 823 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms