RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 FCGRTP55899 365 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF177Q13360 481 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 IHHQ14623 411 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 KIAA1614Q5VZ46 1190 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 TCAIMQ8N3R3 496 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 GORASP2Q9H8Y8 452 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF639Q9UID6 485 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 GUCY1B2O75343 617 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 SPNP16150 400 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 DNAJA1P31689 397 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 HTR7P34969 479 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 HNRNPFP52597 415 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 FAM214AQ32MH5 1076 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 XKR7Q5GH72 579 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ASIC4Q96FT7 647 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ADAM2Q99965 735 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 KATNAL1Q9BW62 490 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 FBXO44Q9H4M3 255 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 RPRD1BQ9NQG5 326 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 RPS6KA6Q9UK32 745 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 TTC34A8MYJ7 566 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 IFRD1O00458 451 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 BCKDHAP12694 445 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 LIPAP38571 399 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 KIR3DL1P43629 444 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC15A1P46059 708 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 DAPP51397 102 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 KCNQ1P51787 676 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 SERINC3Q13530 473 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 BHLHA9Q7RTU4 235 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 METTL4Q8N3J2 472 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 TMEM246Q9BRR3 403 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 CNPPD1Q9BV87 410 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 POPDC3Q9HBV1 291 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 KLHL3Q9UH77 587 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 TEKT2Q9UIF3 430 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 TLR6Q9Y2C9 796 aa11.31□□□□□ -0.6
PPFIA2-227ENST00000552948 SMIM30A4D0T7 59 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 AGAP5A6NIR3 686 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 FPGTO14772 594 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 FPR1P21462 350 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 EIF2DP41214 584 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PPP3CCP48454 512 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ARPC4P59998 168 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PARP15Q460N3 678 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CTXN3Q4LDR2 81 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CXCL17Q6UXB2 119 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 GALNT12Q8IXK2 581 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CD200R1Q8TD46 325 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PHF10Q8WUB8 498 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 DACT3Q96B18 629 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 HSH2DQ96JZ2 352 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CDK5RAP1Q96SZ6 601 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TTPALQ9BTX7 342 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 LOC285095A0A1B0GVY8 99 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 FZD9O00144 591 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CLIC1O00299 241 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ARNTLO00327 626 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 INSIG1O15503 277 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ARHGEF9O43307 516 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ENGP17813 658 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 RPL9P32969 192 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 RYKP34925 604 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CASP3P42574 277 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 RGRP47804 291 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 MVKQ03426 396 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 IL18R1Q13478 541 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CAMK2GQ13555 558 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ZNF648Q5T619 568 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 CPZQ66K79 652 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TRIM48Q8IWZ4 208 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 GTPBP3Q969Y2 492 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 EGLN2Q96KS0 407 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TRPV5Q9NQA5 729 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 NLE1Q9NVX2 485 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 GPR83Q9NYM4 423 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 TLL1O43897 1013 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ERN1O75460 977 aaKnown RBP11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PRSS23O95084 383 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ITPKAP23677 461 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 PRIM2P49643 509 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 RHOAP61586 193 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 SLC35A2P78381 396 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 ZXDBP98169 803 aa11.3□□□□□ -0.6
PPFIA2-227ENST00000552948 SPIBQ01892 262 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms