RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ACY1Q03154 408 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 FOXM1Q08050 763 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 KCNAB1Q14722 419 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 NAA25Q14CX7 972 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TMTC4Q5T4D3 741 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TRIM73Q86UV7 250 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TAX1BP1Q86VP1 789 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 NKAPQ8N5F7 415 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 OR8K5Q8NH50 307 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 KCNE4Q8WWG9 221 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 ANKRD7Q92527 254 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 PDLIM5Q96HC4 596 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TRAPPC9Q96Q05 1148 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 OR6C1Q96RD1 312 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC12A9Q9BXP2 914 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 CHRNA10Q9GZZ6 450 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 FANCEQ9HB96 536 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SEC16AO15027 2179 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 A0A1W2PPV9 198 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC9B1P1A6NJY1 282 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 ISM1B1AKI9 464 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 MAP3K7O43318 606 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PRICKLE3O43900 615 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC16A8O95907 504 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 ENO2P09104 434 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 LIPCP11150 499 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PVRP15151 417 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 FOLR1P15328 257 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 STMN1P16949 149 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SAT1P21673 171 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 OAS2P29728 719 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PGGT1BP53609 377 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PNLIPRP1P54315 467 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 AP1S2P56377 157 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 ZNF460Q14592 562 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 ZKSCAN8Q15776 578 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 UBAP2Q5T6F2 1119 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 FBXO38Q6PIJ6 1188 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 TMEM207Q6UWW9 146 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PPP1R3BQ86XI6 285 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 CEP97Q8IW35 865 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 LMNTD1Q8N9Z9 388 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 MCOLN3Q8TDD5 553 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SMPDL3AQ92484 453 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PKP4Q99569 1192 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 CTRCQ99895 268 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 DPH1Q9BZG8 443 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PARVBQ9HBI1 364 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 SYTL2Q9HCH5 934 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 APMAPQ9HDC9 416 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PDE7BQ9NP56 450 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 FGF21Q9NSA1 209 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 INTS7Q9NVH2 962 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 RARRES3Q9UL19 164 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 MTO1Q9Y2Z2 717 aaKnown RBP11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 KLK4Q9Y5K2 254 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 NBEAQ8NFP9 2946 aa11.3□□□□□ -0.6
TRAFD1-209ENST00000552896 A0A087WUV0 522 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 FAM155BO75949 473 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 DLGAP3O95886 979 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 SYF2O95926 243 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 MAGP20916 626 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 PSMB5P28074 263 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 IMPA1P29218 277 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 RAB10P61026 200 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 MAP7Q14244 749 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 GPR19Q15760 415 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 PHKG1Q16816 387 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 PPP1R3AQ16821 1122 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 SBSNQ6UWP8 590 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 CCDC91Q7Z6B0 441 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 ADAMTSL2Q86TH1 951 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 SYTL1Q8IYJ3 562 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 OR2L3Q8NG85 312 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 ZNF480Q8WV37 535 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC44A1Q8WWI5 657 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 DLG3Q92796 817 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 TCTN2Q96GX1 697 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 FCRL4Q96PJ5 515 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 TXLNGYQ9BZA5 131 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 ULBP3Q9BZM4 244 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 CAB39LQ9H9S4 337 aa11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 STOX2Q9P2F5 926 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-209ENST00000552896 TMEM184BQ9Y519 407 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms