RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SH3KBP1Q96B97 665 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 MRRFQ96E11 262 aaKnown RBP9.69□□□□□ -0.86
LETMD1-234ENST00000552645 PTCD3Q96EY7 689 aaKnown RBP9.69□□□□□ -0.86
LETMD1-234ENST00000552645 FERD3LQ96RJ6 166 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 GFM1Q96RP9 751 aaKnown RBP9.69□□□□□ -0.86
LETMD1-234ENST00000552645 ECSITQ9BQ95 431 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 LRRN3Q9H3W5 708 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 GPAMQ9HCL2 828 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
LETMD1-234ENST00000552645 NCOR2Q9Y618 2525 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 TCRBV9S1A1TA0A576 114 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 MED19A0JLT2 244 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 GSC2O15499 205 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 B4GAT1O43505 415 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CBX6O95503 412 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 ACSL3O95573 720 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 AHSGP02765 367 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 UBTFL6P0CB48 400 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CDK4P11802 303 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 AMD1P17707 334 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 AOAHP28039 575 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 LEPRP48357 1165 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 WDR4P57081 412 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 GPX6P59796 221 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 UBE2IP63279 158 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 ABRQ12979 859 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 RPA4Q13156 261 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 TAF1BQ53T94 588 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 XKR5Q6UX68 686 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 KIAA0408Q6ZU52 694 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 RAB44Q7Z6P3 723 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 PDZD3Q86UT5 571 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 TDRPQ86YL5 185 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 VRK3Q8IV63 474 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 SPNS2Q8IVW8 549 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CNTN4Q8IWV2 1026 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 SIDT2Q8NBJ9 832 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 OR10G6Q8NH81 332 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 DENND1AQ8TEH3 1009 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 TFGQ92734 400 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CDKL2Q92772 493 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CCDC77Q9BR77 488 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 HGH1Q9BTY7 390 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 OR52A5Q9H2C5 316 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 PPCSQ9HAB8 311 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 POT1Q9NUX5 634 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 MOCS1Q9NZB8 636 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 GALPQ9UBC7 116 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 CLCA2Q9UQC9 943 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 RUVBL2Q9Y230 463 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 ASF1AQ9Y294 204 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 TDRKHQ9Y2W6 561 aaKnown RBP9.68□□□□□ -0.86
LETMD1-234ENST00000552645 HEBP2Q9Y5Z4 205 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 PSAT1Q9Y617 370 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 COLEC10Q9Y6Z7 277 aa9.68□□□□□ -0.86
LETMD1-234ENST00000552645 IGHV1OR21-1A0A087WYE8 117 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 A0A1W2PQM1 296 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 SLC5A10A0PJK1 596 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 CXorf49A8MYA2 514 aaPredicted RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 KPNA5O15131 536 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 VPS26AO75436 327 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 MT-CO3P00414 261 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ADRB1P08588 477 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 PNLIPP16233 465 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 MPSTP25325 297 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 GABRB3P28472 473 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 GPR3P46089 330 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 RASA2Q15283 850 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 TRMT5Q32P41 509 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 KBTBD12Q3ZCT8 623 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ZNF658BQ4V348 819 aaPredicted RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 SNAP47Q5SQN1 464 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 RBM20Q5T481 1227 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 PHF19Q5T6S3 580 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 RBM44Q6ZP01 1051 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 TMEM26Q6ZUK4 368 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 FAM47EQ6ZV65 393 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ZNF438Q7Z4V0 828 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 PIM3Q86V86 326 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ZBTB2Q8N680 514 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 OR5AR1Q8NGP9 310 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 UHMK1Q8TAS1 419 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 WDR60Q8WVS4 1066 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 C17orf50Q8WW18 174 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 ELMO2Q96JJ3 720 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 GPR21Q99679 349 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 NUDT22Q9BRQ3 303 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 AARSD1Q9BTE6 412 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 SCNM1Q9BWG6 230 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 PHACTR1Q9C0D0 580 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 TMEM165Q9HC07 324 aa9.67□□□□□ -0.86
LETMD1-234ENST00000552645 SSU72Q9NP77 194 aaKnown RBP9.67□□□□□ -0.86
LETMD1-234ENST00000552645 SMYD2Q9NRG4 433 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms