RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 TPRG1LQ5T0D9 272 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 PRAMEF9Q5VWM5 478 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 GRHL2Q6ISB3 625 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 Q6ZSR9 355 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 TRIM46Q7Z4K8 759 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 LONP2Q86WA8 852 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
CACNB3-223ENST00000552480 PHC3Q8NDX5 983 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 HMGCLL1Q8TB92 370 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
CACNB3-223ENST00000552480 BIRC7Q96CA5 298 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 PDXPQ96GD0 296 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 PPP3R2Q96LZ3 170 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 C12orf66Q96MD2 445 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-223ENST00000552480 PCED1AQ9H1Q7 454 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 CCDC177Q9NQR7 707 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-223ENST00000552480 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
CACNB3-223ENST00000552480 WDR37Q9Y2I8 494 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 DYRK1BQ9Y463 629 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 CCL27Q9Y4X3 112 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 KCNE2Q9Y6J6 123 aa12.31□□□□□ -0.44
CACNB3-223ENST00000552480 DOCK9Q9BZ29 2069 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 A0A1W2PPC4 97 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 MEI4A8MW99 385 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 E7EQ34 232 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 GSC2O15499 205 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 PI15O43692 258 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 KRT34O76011 436 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 WFS1O76024 890 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 KRT16P08779 473 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 GNAZP19086 355 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 MAGEA9P43362 315 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 SRP54P61011 504 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CTBSQ01459 385 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 EMX2Q04743 252 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 GRIK2Q13002 908 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CUL3Q13618 768 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 DOC2AQ14183 400 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 E2F2Q14209 437 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CYP2A13Q16696 494 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 KIF19Q2TAC6 998 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 UAP1L1Q3KQV9 507 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 AGKQ53H12 422 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 XKR6Q5GH73 641 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 C6orf136Q5SQH8 315 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 LCTLQ6UWM7 567 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 GK5Q6ZS86 529 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 Q6ZSR6 202 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 MIER2Q8N344 545 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 RAB42Q8N4Z0 105 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CAMKK1Q8N5S9 505 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 OR13H1Q8NG92 308 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 FBXO27Q8NI29 283 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 UTP4Q969X6 686 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CADM1Q9BY67 442 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 ELOVL6Q9H5J4 265 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 SLC40A1Q9NP59 571 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 GPR27Q9NS67 375 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 TDRKHQ9Y2W6 561 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 HEBP2Q9Y5Z4 205 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 CFAP20Q9Y6A4 193 aaKnown RBP12.3□□□□□ -0.44
CACNB3-223ENST00000552480 ANKRD12Q6UB98 2062 aa12.3□□□□□ -0.44
CACNB3-223ENST00000552480 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 XIRP2A4UGR9 3374 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PDZK1P1A8MUH7 402 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 STK25O00506 426 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 NDUFS2O75306 463 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PDYNP01213 254 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 NPPBP16860 134 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 CD22P20273 847 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 CPOXP36551 454 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 CSTF3Q12996 717 aaKnown RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PRKG2Q13237 762 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 MAD2L1Q13257 205 aaPredicted RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 CLCA4Q14CN2 919 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 IMPG1Q17R60 797 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 ALG11Q2TAA5 492 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PDCD4Q53EL6 469 aaKnown RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 SGO1Q5FBB7 561 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 PRAMEF13Q5VWM6 474 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 FRG2Q64ET8 278 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 DUS1LQ6P1R4 473 aaKnown RBP12.29□□□□□ -0.44
CACNB3-223ENST00000552480 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 LPCAT2Q7L5N7 544 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
CACNB3-223ENST00000552480 FNDC5Q8NAU1 212 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms