RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CAMK2AQ9UQM7 478 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NAALADL1Q9UQQ1 740 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 DTX4Q9Y2E6 619 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 COQ4Q9Y3A0 265 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PKP3Q9Y446 797 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 DOPEY2Q9Y3R5 2298 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SPTBN1Q01082 2364 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 POLEQ07864 2286 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 A0A087X1B8 175 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 OR6C68A6NDL8 312 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PGPEP1LA6NFU8 196 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 C16orf96A6NNT2 1141 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 KCNU1A8MYU2 1149 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 NTN3O00634 580 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC9A3R1O14745 358 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 MGST3O14880 152 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 EIF3DO15371 548 aaKnown RBP eCLIP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HUS1O60921 280 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RNASEH2AO75792 299 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CBX6O95503 412 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 APODP05090 189 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CENPBP07199 599 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CTSLP07711 333 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CHRM4P08173 479 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CD63P08962 238 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RNF224P0DH78 156 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HLA-EP13747 358 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC130P13994 396 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 COX7A2P14406 83 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PSMA4P25789 261 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CD27P26842 260 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 EPHA8P29322 1005 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CD70P32970 193 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 IDUAP35475 653 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ARL3P36405 182 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SKIV2L2P42285 1042 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 MTNR1AP48039 350 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 NDST1P52848 882 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PLK1P53350 603 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RAD23BP54727 409 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ARF3P61204 181 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 UFM1P61960 85 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 DCAF7P61962 342 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PITX1P78337 314 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ARF1P84077 181 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 EFNB1P98172 346 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ZBTB16Q05516 673 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ENPEPQ07075 957 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 FOXD4Q12950 439 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PTP4A2Q12974 167 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 STK4Q13043 487 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PRKG2Q13237 762 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SRSF6Q13247 344 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SNRNP35Q16560 246 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC18A3Q16572 532 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HNRNPA1L2Q32P51 320 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 AWAT1Q58HT5 328 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC45A4Q5BKX6 768 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ARL13AQ5H913 290 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF766Q5HY98 468 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 COLEC12Q5KU26 742 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HECTD3Q5T447 861 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PRAMEF17Q5VTA0 474 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM268Q5VZI3 342 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ARHGAP17Q68EM7 881 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SPOPLQ6IQ16 392 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 GJB7Q6PEY0 223 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 OLFML1Q6UWY5 402 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 IL20RBQ6UXL0 311 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 KDM7AQ6ZMT4 941 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 NEK10Q6ZWH5 1172 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 H1FNTQ75WM6 255 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RRM2BQ7LG56 351 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 MDGA2Q7Z553 956 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RABEPKQ7Z6M1 372 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CPLX4Q7Z7G2 160 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 UNC93AQ86WB7 457 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 CHSY1Q86X52 802 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RFX6Q8HWS3 928 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SPATA2LQ8IUW3 424 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC22A18ASQ8N1D0 253 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 THEM5Q8N1Q8 247 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 GPD1LQ8N335 351 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 PAQR4Q8N4S7 273 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 ZCCHC9Q8N567 271 aaKnown RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 WDTC1Q8N5D0 677 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC4A11Q8NBS3 891 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 DNAAF1Q8NEP3 725 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 OR52N4Q8NGI2 321 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 OR2T3Q8NH03 318 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 FAM110DQ8TAY7 271 aaPredicted RBP2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SPATA20Q8TB22 786 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC2A14Q8TDB8 520 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 C2CD4CQ8TF44 421 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 SLC35F5Q8WV83 523 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HTR3CQ8WXA8 447 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 RAB40AQ8WXH6 277 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 POMGNT1Q8WZA1 660 aa2.37□□□□□ -2.03
CPSF6-207ENST00000551516 HSPH1Q92598 858 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms