RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 C2orf81A6NN90 581 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ISM1B1AKI9 464 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LRRTM2O43300 516 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 WIPF1O43516 503 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 DPM1O60762 260 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ZG16O60844 167 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ALBP02768 609 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 CHRM5P08912 532 aaPredicted RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 RAB40ALP0C0E4 278 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 POU3F2P20265 443 aaPredicted RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 PSMB5P28074 263 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 MAGEA1P43355 309 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TNNT3P45378 269 aaPredicted RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 PRLHRP49683 370 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TERF1P54274 439 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 GEMP55040 296 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 GSDMDP57764 484 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TPM4P67936 248 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TFDP2Q14188 446 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SEMA3AQ14563 771 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 CCSMST1Q4G0I0 132 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TFDP3Q5H9I0 405 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LRRC38Q5VT99 294 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 C1QL3Q5VWW1 255 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 FAAH2Q6GMR7 532 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SPESP1Q6UW49 350 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LINC00696Q6ZRV3 163 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 CHSY3Q70JA7 882 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 KMT5CQ86Y97 462 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 VSTM4Q8IW00 320 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SVOPQ8N4V2 548 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 FAM71DQ8N9W8 422 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LINC01555Q8NAE3 123 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 GLIS1Q8NBF1 620 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 HM13Q8TCT9 377 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 GRHL3Q8TE85 626 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ATG4AQ8WYN0 398 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ELMO1Q92556 727 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ALG3Q92685 438 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 PNPLA2Q96AD5 504 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF778Q96MU6 729 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 GBP5Q96PP8 586 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 CD180Q99467 661 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 TBL1YQ9BQ87 522 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 PITPNM3Q9BZ71 974 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SYNPO2LQ9H987 977 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LIN7BQ9HAP6 207 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 FANCEQ9HB96 536 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC6A20Q9NP91 592 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 DDX56Q9NY93 547 aaKnown RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 FRRS1LQ9P0K9 344 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 IFT80Q9P2H3 777 aaPredicted RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 SH3BGRL2Q9UJC5 107 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 FBXL4Q9UKA2 621 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ACSL5Q9ULC5 683 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 ASF1AQ9Y294 204 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 B3GNT3Q9Y2A9 372 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 COPG1Q9Y678 874 aaKnown RBP6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 COLEC10Q9Y6Z7 277 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 MYO7BQ6PIF6 2116 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 NF1P21359 2839 aa6.58□□□□□ -1.36
PRPF40B-214ENST00000551320 LOC105369274A0A096LPK9 316 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 LOC102723532A0A0G2JNH3 316 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 SSU72P8A0A1W2PR75 194 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 CCDC162PA2VCL2 907 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 OR2W5A6NFC9 320 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 WIPF3A6NGB9 483 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 C2orf74A8MZ97 194 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ZNF487B1APH4 448 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 C9J4A7 227 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 RGS9O75916 674 aaPredicted RBP6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 SMNDC1O75940 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 KLHL18O94889 574 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 RECKO95980 971 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 EPOP01588 193 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 RBP3P10745 1247 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 PYGMP11217 842 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ETS1P14921 441 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ITGALP20701 1170 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 MAGP20916 626 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 AGXTP21549 392 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 ACRV1P26436 265 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 FOLR3P41439 243 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 NR2C2P49116 596 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 KCNK10P57789 538 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 MYBPC3Q14896 1274 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 SLC14A2Q15849 920 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 NKAIN1Q4KMZ8 207 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 CRB2Q5IJ48 1285 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 NXPE4Q6UWF7 544 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 C8orf86Q6ZUL3 223 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 NCCRP1Q6ZVX7 275 aaPredicted RBP6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 BBS12Q6ZW61 710 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 MED25Q71SY5 747 aa6.57□□□□□ -1.36
PRPF40B-214ENST00000551320 COX15Q7KZN9 410 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms