RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 NCKAP1Q9Y2A7 1128 aa19.11■□□□□ 0.65
SSH1-209ENST00000551165 SLC22A3O75751 556 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 CIB2O75838 187 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 SRFP11831 508 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 ACTR3P61158 418 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 PSME3P61289 254 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 PTGR1Q14914 329 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 MAP7D1Q3KQU3 841 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 GGTA1PQ4G0N0 100 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 TPRG1LQ5T0D9 272 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 CYP20A1Q6UW02 462 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 USP30Q70CQ3 517 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 TFGQ92734 400 aaPredicted RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 NEIL2Q969S2 332 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 ELOVL6Q9H5J4 265 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 SCML1Q9UN30 329 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 TDRKHQ9Y2W6 561 aaKnown RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 SLC28A1O00337 649 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 KMOO15229 486 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 KRT6AP02538 564 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 KRT6BP04259 564 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 TEAD1P28347 426 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 KRT6CP48668 564 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 TDGQ13569 410 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 IMPG1Q17R60 797 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 PIGGQ5H8A4 983 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 KBTBD6Q86V97 674 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 LRRC56Q8IYG6 542 aaPredicted RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 HIPK4Q8NE63 616 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 UHRF1Q96T88 793 aaPredicted RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 TRIM8Q9BZR9 551 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 OSGEPL1Q9H4B0 414 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 GMPR2Q9P2T1 348 aaKnown RBP19.1■□□□□ 0.65
SSH1-209ENST00000551165 CA14Q9ULX7 337 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 SUFUQ9UMX1 484 aa19.1■□□□□ 0.65
SSH1-209ENST00000551165 VCANP13611 3396 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 ANKRD28O15084 1053 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 SEC22BO75396 215 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 JUPP14923 745 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 IL9P15248 144 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 NPPBP16860 134 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 CLCNKAP51800 687 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 TAP2Q03519 686 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 ZNF423Q2M1K9 1284 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 FBXO43Q4G163 708 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 PDCD4Q53EL6 469 aaKnown RBP19.09■□□□□ 0.65
SSH1-209ENST00000551165 CATSPEREQ5SY80 951 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 KLHDC8AQ8IYD2 350 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 PPP3R2Q96LZ3 170 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 EBF2Q9HAK2 575 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 LRTM1Q9HBL6 345 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 FGF22Q9HCT0 170 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 SLC17A4Q9Y2C5 497 aa19.09■□□□□ 0.65
SSH1-209ENST00000551165 A0A1W2PPC1 479 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 GLULP15104 373 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 XRCC1P18887 633 aaPredicted RBP19.08■□□□□ 0.65
SSH1-209ENST00000551165 TCN1P20061 433 aaPredicted RBP19.08■□□□□ 0.65
SSH1-209ENST00000551165 CCND1P24385 295 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 MAPK9P45984 424 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 GNPDA1P46926 289 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 ATXN3P54252 364 aaPredicted RBP19.08■□□□□ 0.65
SSH1-209ENST00000551165 PLOD1Q02809 727 aaPredicted RBP19.08■□□□□ 0.65
SSH1-209ENST00000551165 CCNIQ14094 377 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 KIAA0040Q15053 153 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 TRMT5Q32P41 509 aaKnown RBP19.08■□□□□ 0.65
SSH1-209ENST00000551165 RNF165Q6ZSG1 346 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 HLA-CQ95604 372 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 SPDL1Q96EA4 605 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 SNX6Q9UNH7 406 aa19.08■□□□□ 0.65
SSH1-209ENST00000551165 PSMG1O95456 288 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 MRPL19P49406 292 aaKnown RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 POLR2JP52435 117 aaKnown RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 MS4A2Q01362 244 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 RPA4Q13156 261 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 RCAN2Q14206 197 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 RCN1Q15293 331 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 PAGE3Q5JUK9 113 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 FRG2Q64ET8 278 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 C8orf82Q6P1X6 216 aaPredicted RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 CHCHD4Q8N4Q1 142 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 CLHC1Q8NHS4 586 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 FRG2BQ96QU4 278 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 MTERF1Q99551 399 aaKnown RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 BTBD1Q9H0C5 482 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 SLC2A4RGQ9NR83 387 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 ADA2Q9NZK5 511 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 NOP53Q9NZM5 478 aaKnown RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 SLAMF8Q9P0V8 285 aa19.08■□□□□ 0.64
SSH1-209ENST00000551165 PRPF19Q9UMS4 504 aaKnown RBP19.08■□□□□ 0.64
SSH1-209ENST00000551165 SH3BGRLO75368 114 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 C7P10643 843 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 DDX39BQ13838 428 aaKnown RBP19.07■□□□□ 0.64
SSH1-209ENST00000551165 CAPRIN1Q14444 709 aaKnown RBP19.07■□□□□ 0.64
SSH1-209ENST00000551165 TIGD2Q4W5G0 525 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 PYCR3Q53H96 274 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 PTCRAQ6ISU1 281 aaPredicted RBP19.07■□□□□ 0.64
SSH1-209ENST00000551165 APIPQ96GX9 242 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 BMFQ96LC9 184 aa19.07■□□□□ 0.64
SSH1-209ENST00000551165 PNMA8BQ9ULN7 279 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms