RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CFAP61Q8NHU2 1237 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 PEX13Q92968 403 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 HES6Q96HZ4 224 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 ZNF285Q96NJ3 590 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 IL17FQ96PD4 163 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 SPSB2Q99619 263 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 TSSK1BQ9BXA7 367 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 CIDEBQ9UHD4 219 aa20.81■□□□□ 0.92
SMARCC2-210ENST00000550519 DSCR3O14972 297 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 PIM1P11309 404 aaPredicted RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 COL8A1P27658 744 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 AOAHP28039 575 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 PPARGP37231 505 aaPredicted RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 GLRBP48167 497 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 FASTKD1Q53R41 847 aaKnown RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 ZC3H12BQ5HYM0 836 aaKnown RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 TCTE1Q5JU00 501 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 FIGLAQ6QHK4 219 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 IGFL2Q6UWQ7 119 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 NLRP9Q7RTR0 991 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 UBE2Q2Q8WVN8 375 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 C5orf34Q96MH7 638 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 WDR77Q9BQA1 342 aaPredicted RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 CUTCQ9NTM9 273 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 INTS7Q9NVH2 962 aaKnown RBP20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 CDC23Q9UJX2 597 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 TCAF1Q9Y4C2 921 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 CSAG2Q9Y5P2 127 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 HS3ST3B1Q9Y662 390 aa20.8■□□□□ 0.92
SMARCC2-210ENST00000550519 A0A0U1RQJ8 604 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 RASGRF2O14827 1237 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 LIASO43766 372 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 PRICKLE3O43900 615 aaPredicted RBP20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 FKBP9O95302 570 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 APOA4P06727 396 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 MCM3P25205 808 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 GRIA3P42263 894 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 PRAMEP78395 509 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 GRM7Q14831 915 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 ZNF787Q6DD87 383 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 KIRREL2Q6UWL6 708 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 TAX1BP1Q86VP1 789 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 PPP4R1Q8TF05 950 aa20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 MRM3Q9HC36 420 aaKnown RBP20.79■□□□□ 0.92
SMARCC2-210ENST00000550519 PCM1Q15154 2024 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 CREBBPQ92793 2442 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 FITM1A5D6W6 292 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 TARM1B6A8C7 271 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 PRMT5O14744 637 aaPredicted RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 ALOX12BO75342 701 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 IFNB1P01574 187 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 KIF5AQ12840 1032 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 ELOAQ14241 798 aaKnown RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 SF1Q15637 639 aaKnown RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 AARS2Q5JTZ9 985 aaKnown RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 LDB1Q86U70 411 aaPredicted RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 KRT222Q8N1A0 295 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 ZUFSPQ96AP4 578 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 FRMD8P1Q9BZ68 369 aaPredicted RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 AGPAT4Q9NRZ5 378 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 IL1RAPL1Q9NZN1 696 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 MARCH4Q9P2E8 410 aaPredicted RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 NXT1Q9UKK6 140 aaKnown RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 SLC39A10Q9ULF5 831 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 NOVA2Q9UNW9 492 aaKnown RBP20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 CELSR2Q9HCU4 2923 aa20.78■□□□□ 0.92
SMARCC2-210ENST00000550519 VSTM2BA6NLU5 285 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 E7EVH7 732 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 DCTP40126 519 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 HIF1AQ16665 826 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 AGAP7PQ5VUJ5 663 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 TMEM139Q8IV31 216 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 ST6GALNAC3Q8NDV1 305 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 AGAP4Q96P64 663 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 BAG1Q99933 345 aaPredicted RBP20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 SELENOSQ9BQE4 189 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 RAB11FIP5Q9BXF6 653 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 RAB6BQ9NRW1 208 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 CATSPERZQ9NTU4 200 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 CTSFQ9UBX1 484 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 ANAPC5Q9UJX4 755 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 KLK4Q9Y5K2 254 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 CACNA1DQ01668 2161 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 CNTRLQ7Z7A1 2325 aa20.77■□□□□ 0.92
SMARCC2-210ENST00000550519 SRPX2O60687 465 aaPredicted RBP20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 CTSVO60911 334 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 ETS1P14921 441 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 OR1D4P47884 311 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 TTPAP49638 278 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 TMED2Q15363 201 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 FAM214AQ32MH5 1076 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 SHISA6Q6ZSJ9 500 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 PRUNE1Q86TP1 453 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 KCNMB4Q86W47 210 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 TTC29Q8NA56 475 aaPredicted RBP20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 COG1Q8WTW3 980 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 RAD51AP1Q96B01 352 aa20.76■□□□□ 0.91
SMARCC2-210ENST00000550519 LHPPQ9H008 270 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms