RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	GRIA3	P42263	894 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MLLT3	P42568	568 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	HSD11B2	P80365	405 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	CAV1	Q03135	178 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	TUBB3	Q13509	450 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	CYP2A13	Q16696	494 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ERCC6L	Q2NKX8	1250 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	TEX35	Q5T0J7	233 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	DCAF12	Q5T6F0	453 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM69B	Q5VUD6	431 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ARMC6	Q6NXE6	501 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	KLHL35	Q6PF15	583 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	DTWD1	Q8N5C7	304 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	C19orf47	Q8N9M1	422 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	OR2A1	Q8NGT9	310 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	OR9A1P	Q8NGU1	263 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	UHMK1	Q8TAS1	419 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZNF480	Q8WV37	535 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MRRF	Q96E11	262 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	VPS39	Q96JC1	886 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	CD180	Q99467	661 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MIPEP	Q99797	713 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ACAT2	Q9BWD1	397 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	SPRTN	Q9H040	489 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	CCDC68	Q9H2F9	335 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC6A20	Q9NP91	592 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	C1GALT1	Q9NS00	363 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	FGF21	Q9NSA1	209 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	SOHLH2	Q9NX45	425 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	OR6C2	Q9NZP2	312 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	KLHL42	Q9P2K6	505 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	TRMT6	Q9UJA5	497 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	NFU1	Q9UMS0	254 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	PDE10A	Q9Y233	779 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	VWA7	Q9Y334	891 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ATM	Q13315	3056 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ASH1L	Q9NR48	2969 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MAST4	O15021	2626 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283		A0A0J9YY10	115 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283		F8W8V4	182 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	CDC7	O00311	574 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	PFDN6	O15212	129 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	RAD1	O60671	282 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	CTSV	O60911	334 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	MED26	O95402	600 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZBTB11	O95625	1053 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	NTRK1	P04629	796 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	LIPC	P11150	499 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SPTB	P11277	2137 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	IMPA1	P29218	277 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SKIV2L2	P42285	1042 aa	Known RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	FOXL2	P58012	376 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	CYP4F2	P78329	520 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	DLG1	Q12959	904 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	PRKAA1	Q13131	559 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC5A12	Q1EHB4	618 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	C18orf21	Q32NC0	220 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM199X	Q6PEV8	388 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	NEK10	Q6ZWH5	1172 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	UBE2R2	Q712K3	238 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC26A11	Q86WA9	606 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SHISA5	Q8N114	240 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	DNAJC22	Q8N4W6	341 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	PPM1N	Q8N819	430 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	GALNT6	Q8NCL4	622 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	HMGCLL1	Q8TB92	370 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	RAD51AP1	Q96B01	352 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	RBBP8	Q99708	897 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	PHACTR1	Q9C0D0	580 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	RHOJ	Q9H4E5	214 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM114A2	Q9NRY5	505 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	WDR70	Q9NW82	654 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	TAS2R13	Q9NYV9	303 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	IL17B	Q9UHF5	180 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC39A10	Q9ULF5	831 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	MRPS18B	Q9Y676	258 aa	Known RBP	10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	COMMD10	Q9Y6G5	202 aa		10.8	□□□□□ -0.68
RAB5B-208	ENST00000550283	IGSF10	Q6WRI0	2623 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	NPEPPSL1	A6NEC2	478 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	TMEM150C	B9EJG8	249 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283		E7ENX8	843 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	TERT	O14746	1132 aa	Known RBP	10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	SYF2	O95926	243 aa	Known RBP	10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	LIF	P15018	202 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZNF37A	P17032	561 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	PNLIPRP1	P54315	467 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	TUBB4B	P68371	445 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	TAP2	Q03519	686 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	GPS2	Q13227	327 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	BMPR2	Q13873	1038 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	KIR2DS3	Q14952	304 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	PPP1R3A	Q16821	1122 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	TTLL9	Q3SXZ7	439 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM45BP	Q6NSW5	357 aa		10.79	□□□□□ -0.68
RAB5B-208	ENST00000550283	PCSK4	Q6UW60	755 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms