RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TENM4Q6N022 2769 aa10.46□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM237BA0A1B0GVD1 139 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 A0A1B0GX78 115 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 SDR42E2A6NKP2 422 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF185O15231 689 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 PDGFAP04085 211 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 CHRM3P20309 590 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MGAT1P26572 445 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 PEBP1P30086 187 aaKnown RBP10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 OTX2P32243 289 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 KCNJ1P48048 391 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MLLT10P55197 1068 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 EIF3BP55884 814 aaKnown RBP10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 SOX8P57073 446 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 CRADDP78560 199 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 GPS1Q13098 491 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 CHAF1BQ13112 559 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 ATP1A4Q13733 1029 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 GRB7Q14451 532 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 ARHGAP19Q14CB8 494 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 CYP2A13Q16696 494 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 TYSND1Q2T9J0 566 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 DEFB110Q30KQ9 67 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 ANKRD20A4Q4UJ75 823 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 VWA5B1Q5TIE3 1220 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 C1orf189Q5VU69 101 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 CASC4Q6P4E1 433 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MICALCLQ6ZW33 695 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MRGPREQ86SM8 312 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MCUQ8NE86 351 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 FDCSPQ8NFU4 85 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 LPGAT1Q92604 370 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 PNPLA2Q96AD5 504 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 MFSD3Q96ES6 412 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 BIRC8Q96P09 236 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 ATP13A2Q9NQ11 1180 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLAMF7Q9NQ25 335 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM114A2Q9NRY5 505 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 INTS10Q9NVR2 710 aaKnown RBP10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 SYBUQ9NX95 663 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 DHCR7Q9UBM7 475 aaKnown RBP10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 PLAAQ9Y263 795 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM169AQ9Y6X4 670 aa10.45□□□□□ -0.74
VTI1BP3-201ENST00000550220 FITM1A5D6W6 292 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CLEC18AA5D8T8 446 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 A6NL46 340 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 E5RI56 91 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 DSCR3O14972 297 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRICKLE3O43900 615 aaPredicted RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 MATN4O95460 622 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 KRT14P02533 472 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 SPTBP11277 2137 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PKMP14618 531 aaKnown RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CMPK1P30085 196 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 FMO4P31512 558 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 GRIA3P42263 894 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 GCGRP47871 477 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 THOC5Q13769 683 aaKnown RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 KCNJ11Q14654 390 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 MYBPC3Q14896 1274 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 TTLL9Q3SXZ7 439 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CTSL3PQ5NE16 218 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 DCAF10Q5QP82 559 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 NEPROQ6NW34 567 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 JMJD6Q6NYC1 403 aaPredicted RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRMT9Q6P2P2 845 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CLEC18BQ6UXF7 455 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 TTLL10Q6ZVT0 673 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 NEK10Q6ZWH5 1172 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 OVCH1Q7RTY7 1134 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 GALNT16Q8N428 558 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 RASGEF1CQ8N431 466 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRELID2Q8N945 189 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CLEC18CQ8NCF0 446 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 GABPB2Q8TAK5 448 aaPredicted RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 LKAAEAR1Q8TD35 194 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CALML6Q8TD86 181 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 MAGOHBQ96A72 148 aaKnown RBP10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF285Q96NJ3 590 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 IL17FQ96PD4 163 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 SELENOSQ9BQE4 189 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLC29A3Q9BZD2 475 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLC26A1Q9H2B4 701 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCDC68Q9H2F9 335 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 CUTCQ9NTM9 273 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 P4HTMQ9NXG6 502 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 ANKMY1Q9P2S6 941 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 MAP4K5Q9Y4K4 846 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 COMMD10Q9Y6G5 202 aa10.44□□□□□ -0.74
VTI1BP3-201ENST00000550220 PIKFYVEQ9Y2I7 2098 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 CTAGE9A4FU28 777 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 AGPSO00116 658 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 HCRTR1O43613 425 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 VPS26AO75436 327 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 SORBS2O94875 1100 aaKnown RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 CATP04040 527 aaKnown RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 MMP11P24347 488 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 ARNTP27540 789 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms