RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TBR1Q16650 682 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 CRTC2Q53ET0 693 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 LRRC8EQ6NSJ5 796 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 UGT3A1Q6NUS8 523 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 BORAQ6PGQ7 559 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 ANKMY2Q8IV38 441 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 LMNTD1Q8N9Z9 388 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 OR9A1PQ8NGU1 263 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 DENND1AQ8TEH3 1009 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 MR1Q95460 341 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 CLIP3Q96DZ5 547 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 NDNQ99608 321 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 ERP44Q9BS26 406 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 SLC7A5P2Q9GIP4 190 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 DPH5Q9H2P9 285 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 TAS2R13Q9NYV9 303 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 WHRNQ9P202 907 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 SLC17A6Q9P2U8 582 aa16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 CORO1CQ9ULV4 474 aaPredicted RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 MRPS18BQ9Y676 258 aaKnown RBP16.6■□□□□ 0.25
CHMP1A-208ENST00000550102 E7ESA3 106 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 KATNA1O75449 491 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 HBQ1P09105 142 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 ERGP11308 486 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 OAS2P29728 719 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 GABRA4P48169 554 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 RGS4P49798 205 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 CKAP4Q07065 602 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 LY6DQ14210 128 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 ARHGAP19Q14CB8 494 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 FASTKD3Q14CZ7 662 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 CYP2A13Q16696 494 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 TRMT10BQ6PF06 316 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 ZNF572Q7Z3I7 529 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 FAM20CQ8IXL6 584 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 CPNE9Q8IYJ1 553 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 SLC38A9Q8NBW4 561 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 ACTL8Q9H568 366 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 ZFATQ9P243 1243 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 PLCL2Q9UPR0 1127 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 AP1M2Q9Y6Q5 423 aa16.59■□□□□ 0.25
CHMP1A-208ENST00000550102 MDC1Q14676 2089 aaKnown RBP16.58■□□□□ 0.25
CHMP1A-208ENST00000550102 ZNF839A8K0R7 811 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 NKX2-8O15522 239 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 ZSCAN9O15535 394 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PRICKLE3O43900 615 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PRB1P04280 392 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 MCM3P25205 808 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PSMB5P28074 263 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 RORAP35398 523 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 HSD17B2P37059 387 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 NAA25Q14CX7 972 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 RBM20Q5T481 1227 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 TEDDM1Q5T9Z0 273 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PRAMEF17Q5VTA0 474 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF517Q6ZMY9 492 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PIWIL4Q7Z3Z4 852 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 DSELQ8IZU8 1212 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 DNAJC22Q8N4W6 341 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 FBXO15Q8NCQ5 510 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 FBXO36Q8NEA4 188 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 ASB11Q8WXH4 323 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 SMPDL3AQ92484 453 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 MED8Q96G25 268 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 MIPEPQ99797 713 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 GPR87Q9BY21 358 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM117AQ9C073 453 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 RAB17Q9H0T7 212 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 PCMTD2Q9NV79 361 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 IRAK4Q9NWZ3 460 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 SRPK3Q9UPE1 567 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 KLHL20Q9Y2M5 609 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 UTP11Q9Y3A2 253 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 FASNP49327 2511 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF462Q96JM2 2506 aa16.58■□□□□ 0.24
CHMP1A-208ENST00000550102 MEN1O00255 615 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF749O43361 778 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 HCRTR1O43613 425 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 AHSGP02765 367 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 GABRB3P28472 473 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 SKIV2L2P42285 1042 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 CDKN2DP55273 166 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 RPS15P62841 145 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 MGAT5Q09328 741 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 CBLBQ13191 982 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 LINC00303Q3SY05 128 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 ATP1A1-AS1Q5TC04 95 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 DUPD1Q68J44 220 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 C16orf46Q6P387 395 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM199XQ6PEV8 388 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 FIGLAQ6QHK4 219 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 ZBED8Q8IZ13 594 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 OR2L3Q8NG85 312 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 SEC14L1Q92503 715 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 DPH2Q9BQC3 489 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 CHST8Q9H2A9 424 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms