RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GPR179Q6PRD1 2367 aa27.88■■■□□ 2.05
BRF1-213ENST00000548421 PCM1Q15154 2024 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 VIMP08670 466 aaKnown RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 ALPPL2P10696 532 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 CCND1P24385 295 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 CCR10P46092 362 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 GALNT1Q10472 559 aaPredicted RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 LCP2Q13094 533 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 PLCL1Q15111 1095 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 C14orf28Q4W4Y0 310 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 ARL13AQ5H913 290 aaPredicted RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 FAM47EQ6ZV65 393 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 OR2I1PQ8NGU4 316 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 OR2L8Q8NGY9 312 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 ZNF317Q96PQ6 595 aaPredicted RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 NRTNQ99748 197 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 SGPP1Q9BX95 441 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 XKR8Q9H6D3 395 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 EML4Q9HC35 981 aaKnown RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 ZBTB26Q9HCK0 441 aa27.87■■■□□ 2.05
BRF1-213ENST00000548421 SEMA4BQ9NPR2 832 aaPredicted RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 INTS7Q9NVH2 962 aaKnown RBP27.87■■■□□ 2.05
BRF1-213ENST00000548421 MLYCDO95822 493 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 CHRNGP07510 517 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 EPB42P16452 691 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 ATXN3P54252 364 aaPredicted RBP27.86■■■□□ 2.05
BRF1-213ENST00000548421 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.86■■■□□ 2.05
BRF1-213ENST00000548421 THOC6Q86W42 341 aaKnown RBP27.86■■■□□ 2.05
BRF1-213ENST00000548421 LSMEM2Q8N112 164 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 ARL10Q8N8L6 244 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 LINC01555Q8NAE3 123 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 KYQ8NBH2 561 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 TRPC4APQ8TEL6 797 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 SMPDL3AQ92484 453 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 CHMP6Q96FZ7 201 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 C7orf26Q96N11 449 aa27.86■■■□□ 2.05
BRF1-213ENST00000548421 ARID1BQ8NFD5 2236 aaPredicted RBP27.86■■■□□ 2.05
BRF1-213ENST00000548421 KATNA1O75449 491 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 TSPAN8P19075 237 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 TSTA3Q13630 321 aaPredicted RBP27.85■■■□□ 2.05
BRF1-213ENST00000548421 RBBP7Q16576 425 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 ATG14Q6ZNE5 492 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 TMEM26Q6ZUK4 368 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 AMIGO1Q86WK6 493 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 MINDY1Q8N5J2 469 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 SNX31Q8N9S9 440 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 LMNTD1Q8N9Z9 388 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 JPH3Q8WXH2 748 aaPredicted RBP27.85■■■□□ 2.05
BRF1-213ENST00000548421 SORT1Q99523 831 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 SRMSQ9H3Y6 488 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 OR6C2Q9NZP2 312 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 STK38LQ9Y2H1 464 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 WDR87Q6ZQQ6 2873 aa27.85■■■□□ 2.05
BRF1-213ENST00000548421 CDC16Q13042 620 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 BIRC2Q13490 618 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 ZCCHC8Q6NZY4 707 aaKnown RBP27.84■■■□□ 2.05
BRF1-213ENST00000548421 SUSD1Q6UWL2 747 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 LRRC34Q8IZ02 419 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 C2orf73Q8N5S3 287 aaPredicted RBP27.84■■■□□ 2.05
BRF1-213ENST00000548421 OR4E2Q8NGC2 313 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 OR4C6Q8NH72 309 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 SH3KBP1Q96B97 665 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 KCNH6Q9H252 994 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 NOL11Q9H8H0 719 aaKnown RBP27.84■■■□□ 2.05
BRF1-213ENST00000548421 IPPKQ9H8X2 491 aa27.84■■■□□ 2.05
BRF1-213ENST00000548421 LNP1A1A4G5 178 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 GMNCA6NCL1 334 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 SRRM3A6NNA2 597 aaPredicted RBP27.83■■■□□ 2.05
BRF1-213ENST00000548421 PCDHGA12O60330 932 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 EDF1O60869 148 aaKnown RBP27.83■■■□□ 2.05
BRF1-213ENST00000548421 ZNF806P0C7X5 589 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 CUZD1Q86UP6 607 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 OR4K3Q96R72 315 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 ZNF382Q96SR6 550 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 MIPEPQ99797 713 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 PCBD2Q9H0N5 130 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 UCK1Q9HA47 277 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 ABCF3Q9NUQ8 709 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 RAP2CQ9Y3L5 183 aa27.83■■■□□ 2.05
BRF1-213ENST00000548421 FAM221BA6H8Z2 402 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 UBFD1O14562 309 aaKnown RBP27.83■■■□□ 2.04
BRF1-213ENST00000548421 PPM1DO15297 605 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 CCNG1P51959 295 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 SEC24CP53992 1094 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 PRKAA1Q13131 559 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 THEMIS2Q5TEJ8 643 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 PRAMEF13Q5VWM6 474 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 CRLF3Q8IUI8 442 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 SLC35F3Q8IY50 421 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 SETD7Q8WTS6 366 aaKnown RBP27.83■■■□□ 2.04
BRF1-213ENST00000548421 ATP6V1E2Q96A05 226 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.83■■■□□ 2.04
BRF1-213ENST00000548421 SHCBP1LQ9BZQ2 653 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 ILKAPQ9H0C8 392 aaPredicted RBP27.83■■■□□ 2.04
BRF1-213ENST00000548421 FGFR1OP2Q9NVK5 253 aa27.83■■■□□ 2.04
BRF1-213ENST00000548421 GOLGA4Q13439 2230 aaKnown RBP27.82■■■□□ 2.04
BRF1-213ENST00000548421 PPP6CO00743 305 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 OR7A17O14581 309 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 OTCP00480 354 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 ZNF883P0CG24 379 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms