RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PKLRP30613 574 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 FMO4P31512 558 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 GABRA4P48169 554 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TTPAP49638 278 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 VPS41P49754 854 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RAB28P51157 221 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RRADP55042 308 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 EIF3BP55884 814 aaKnown RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 ATP1A4Q13733 1029 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 GRB7Q14451 532 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TMED2Q15363 201 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SLC5A12Q1EHB4 618 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 NADK2Q4G0N4 442 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 NKAIN1Q4KMZ8 207 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RNFT1Q5M7Z0 435 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RHBDD2Q6NTF9 364 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TLDC1Q6P9B6 456 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 FIGLAQ6QHK4 219 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 UNC5DQ6UXZ4 953 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 C4orf22Q6V702 233 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MED25Q71SY5 747 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 OTOAQ7RTW8 1153 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SDCCAG8Q86SQ7 713 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TMEM102Q8N9M5 508 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 LINC01555Q8NAE3 123 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 FDCSPQ8NFU4 85 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 ADAMTS17Q8TE56 1095 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MAIP1Q8WWC4 291 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PEX13Q92968 403 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MIB2Q96AX9 1013 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 FAM136AQ96C01 138 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SGSM3Q96HU1 749 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 NDC1Q9BTX1 674 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 NUDT9Q9BW91 350 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 IL22Q9GZX6 179 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 P2RY12Q9H244 342 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 MLXIPLQ9NP71 852 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TREX1Q9NSU2 369 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 SYBUQ9NX95 663 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 EURLQ9NYK6 297 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 LUZP4Q9P127 313 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 VPS4AQ9UN37 437 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 RUVBL2Q9Y230 463 aaKnown RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 ZKSCAN5Q9Y2L8 839 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PTRH2Q9Y3E5 179 aaKnown RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF451Q9Y4E5 1061 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 PCDHGA9Q9Y5G4 932 aaKnown RBP6.45□□□□□ -1.38
SCAF11-211ENST00000547950 COL6A6A6NMZ7 2263 aa6.45□□□□□ -1.38
SCAF11-211ENST00000547950 TCRBV7S3A2A0A539 114 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 KRT87PA6NCN2 255 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 H3BMH7 237 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MASP2O00187 686 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 AP3B1O00203 1094 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 RASGRF2O14827 1237 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 KPNA5O15131 536 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CHRM3P20309 590 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 FOLR3P41439 243 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 GPS1Q13098 491 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 SSPNQ14714 243 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CCSMST1Q4G0I0 132 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 ZC3H12BQ5HYM0 836 aaKnown RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 ZNF385CQ66K41 422 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 FCRL6Q6DN72 434 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MRNIPQ6NTE8 343 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CASC4Q6P4E1 433 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 LRRC8BQ6P9F7 803 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 DRICH1Q6PGQ1 229 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CNSTQ6PJW8 725 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 TTLL10Q6ZVT0 673 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 LRRC6Q86X45 466 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 RAB43Q86YS6 212 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 TMEM151BQ8IW70 566 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 DCUN1D3Q8IWE4 304 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 LRRC8AQ8IWT6 810 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 SVOPQ8N4V2 548 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 PRELID2Q8N945 189 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 TRIM58Q8NG06 486 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 OR2L8Q8NGY9 312 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 RNF217Q8TC41 542 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 CPT1CQ8TCG5 803 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 NANOS1Q8WY41 292 aaKnown RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 RAD51AP1Q96B01 352 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 SLC22A18Q96BI1 424 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 PTERQ96BW5 349 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MS4A14Q96JA4 679 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 FER1L6-AS2Q96M78 137 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 FOPNLQ96NB1 174 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 GBP5Q96PP8 586 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 PANX3Q96QZ0 392 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MIPEPQ99797 713 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 C17orf62Q9BQA9 187 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 SELENOSQ9BQE4 189 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 DHRS4Q9BTZ2 278 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 MENTQ9BUN1 341 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 KIFC1Q9BW19 673 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 SLAMF7Q9NQ25 335 aa6.44□□□□□ -1.38
SCAF11-211ENST00000547950 EIF2B3Q9NR50 452 aaKnown RBP6.44□□□□□ -1.38
SCAF11-211ENST00000547950 HOMER3Q9NSC5 361 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms