RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ADRA1DP25100 572 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 SF1Q15637 639 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 ZNF787Q6DD87 383 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 PTRHD1Q6GMV3 140 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 FIGLAQ6QHK4 219 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 CUZD1Q86UP6 607 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 TTC29Q8NA56 475 aaPredicted RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 GSDMBQ8TAX9 411 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 ASZ1Q8WWH4 475 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 CNDP1Q96KN2 507 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 RANBP9Q96S59 729 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 MENTQ9BUN1 341 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 RBSNQ9H1K0 784 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 CUTCQ9NTM9 273 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 INTS7Q9NVH2 962 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 NTNG1Q9Y2I2 539 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 COPG1Q9Y678 874 aaKnown RBP19.54■□□□□ 0.72
SSH1-207ENST00000547862 MAU2Q9Y6X3 613 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 UNC79Q9P2D8 2635 aa19.54■□□□□ 0.72
SSH1-207ENST00000547862 DSCR3O14972 297 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 KLHL41O60662 606 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 DDAH2O95865 285 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 S1PR4O95977 384 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 PPARGP37231 505 aaPredicted RBP19.53■□□□□ 0.72
SSH1-207ENST00000547862 OR1D4P47884 311 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 ARSFP54793 590 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 SESN2P58004 480 aaPredicted RBP19.53■□□□□ 0.72
SSH1-207ENST00000547862 CRADDP78560 199 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 AIMP2Q13155 320 aaKnown RBP19.53■□□□□ 0.72
SSH1-207ENST00000547862 OASLQ15646 514 aaKnown RBP19.53■□□□□ 0.72
SSH1-207ENST00000547862 AARS2Q5JTZ9 985 aaKnown RBP19.53■□□□□ 0.72
SSH1-207ENST00000547862 FCRL6Q6DN72 434 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 UNC5DQ6UXZ4 953 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 COX15Q7KZN9 410 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 CCDC89Q8N998 374 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 OR2L8Q8NGY9 312 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 FKBP10Q96AY3 582 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 SLC22A18Q96BI1 424 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 HES6Q96HZ4 224 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 SELENOSQ9BQE4 189 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 NFS1Q9Y697 457 aa19.53■□□□□ 0.72
SSH1-207ENST00000547862 RASGRF2O14827 1237 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 NRP2O60462 931 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 SUN1O94901 812 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 VSX2P58304 361 aaPredicted RBP19.52■□□□□ 0.72
SSH1-207ENST00000547862 ACVR1Q04771 509 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 GRB7Q14451 532 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 RBBP7Q16576 425 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 IRAK1BP1Q5VVH5 260 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 PRAMEF13Q5VWM6 474 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 CNSTQ6PJW8 725 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 MAMDC2Q7Z304 686 aaPredicted RBP19.52■□□□□ 0.72
SSH1-207ENST00000547862 TMEM139Q8IV31 216 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 PARP9Q8IXQ6 854 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 PRSS58Q8IYP2 241 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 TXLNBQ8N3L3 684 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 C5orf34Q96MH7 638 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 MIPEPQ99797 713 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 WDR77Q9BQA1 342 aaPredicted RBP19.52■□□□□ 0.72
SSH1-207ENST00000547862 CARD6Q9BX69 1037 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 PCDHGA10Q9Y5H3 936 aa19.52■□□□□ 0.72
SSH1-207ENST00000547862 CACNA1DQ01668 2161 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 CROCCQ5TZA2 2017 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 SOCS6O14544 535 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 PRMT5O14744 637 aaPredicted RBP19.51■□□□□ 0.71
SSH1-207ENST00000547862 GPC4O75487 556 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 CBX6O95503 412 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 CLDN1O95832 211 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 ZSCAN5DPP0CG00 497 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 MMP11P24347 488 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 EIF3BP55884 814 aaKnown RBP19.51■□□□□ 0.71
SSH1-207ENST00000547862 GRM7Q14831 915 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 NKG7Q16617 165 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 TUBB8Q3ZCM7 444 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 CCSMST1Q4G0I0 132 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 ZC3H12BQ5HYM0 836 aaKnown RBP19.51■□□□□ 0.71
SSH1-207ENST00000547862 TTC23LQ6PF05 361 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 IGFL3Q6UXB1 125 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 OVCH1Q7RTY7 1134 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 SPC24Q8NBT2 197 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 FAM136AQ96C01 138 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 SPSB2Q99619 263 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 GNPTGQ9UJJ9 305 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 RIMKLBQ9ULI2 386 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 TTC7AQ9ULT0 858 aaPredicted RBP19.51■□□□□ 0.71
SSH1-207ENST00000547862 NOVA2Q9UNW9 492 aaKnown RBP19.51■□□□□ 0.71
SSH1-207ENST00000547862 SLC5A6Q9Y289 635 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 HS3ST3B1Q9Y662 390 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 FAM169AQ9Y6X4 670 aa19.51■□□□□ 0.71
SSH1-207ENST00000547862 A0A0J9YVX5 310 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 CD3EAPO15446 510 aaKnown RBP19.5■□□□□ 0.71
SSH1-207ENST00000547862 LDLRP01130 860 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 PIM1P11309 404 aaPredicted RBP19.5■□□□□ 0.71
SSH1-207ENST00000547862 AOAHP28039 575 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 STIP1P31948 543 aaKnown RBP19.5■□□□□ 0.71
SSH1-207ENST00000547862 GCGRP47871 477 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 KCTD19Q17RG1 926 aaPredicted RBP19.5■□□□□ 0.71
SSH1-207ENST00000547862 Q6ZS92 163 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 NLRP9Q7RTR0 991 aa19.5■□□□□ 0.71
SSH1-207ENST00000547862 SLC13A5Q86YT5 568 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms