RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLCO1C1Q9NYB5 712 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 MAD2L2Q9UI95 211 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 B3GALT5Q9Y2C3 310 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 PADI2Q9Y2J8 665 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ANGPTL3Q9Y5C1 460 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 ARAP3Q8WWN8 1544 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 SETBP1Q9Y6X0 1596 aa4.09□□□□□ -1.75
SCAF11-210ENST00000547654 TMEM272A0A1B0GTI8 110 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 A0A1W2PPW3 197 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 ELOVL7A1L3X0 281 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 C5orf51A6NDU8 294 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 DUXAA6NLW8 204 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 STMND1H3BQB6 276 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SPINT2O43291 252 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SSX5O60225 188 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF217O75362 1048 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 AKR7A3O95154 331 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 TGFAP01135 160 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 C9P02748 559 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 OR2T7P0C7T2 308 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 KRT5P13647 590 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 RPS2P15880 293 aaKnown RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 CD22P20273 847 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 HRH2P25021 359 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 ADSSP30520 456 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SLC6A6P31641 620 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 CHRNA3P32297 505 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 CUX1P39880 1505 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 KCNJ4P48050 445 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NPBWR1P48145 328 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 UCP2P55851 309 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 DLK1P80370 383 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 GAD2Q05329 585 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 PLA2G7Q13093 441 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 TRADDQ15628 312 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 INPP5JQ15735 1006 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 C9orf50Q5SZB4 431 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 LRRC38Q5VT99 294 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NEK5Q6P3R8 708 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 KCTD18Q6PI47 426 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NHLRC1Q6VVB1 395 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 MARK2Q7KZI7 788 aaKnown RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM110Q86TL2 294 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 CCNYQ8ND76 341 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 GMCL1P1Q8NEA9 526 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 OR2AJ1Q8NGZ0 328 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 ARRDC2Q8TBH0 407 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SLC35F5Q8WV83 523 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 DNAAF4Q8WXU2 420 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NR4A3Q92570 626 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SYN2Q92777 582 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 CDKN2AIPNLQ96HQ2 116 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SPATA13Q96N96 652 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 PANX3Q96QZ0 392 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NT5C3AQ9H0P0 336 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 DDX47Q9H0S4 455 aaKnown RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 DPAGT1Q9H3H5 408 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 SEBOXQ9HB31 216 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 NGBQ9NPG2 151 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 P4HTMQ9NXG6 502 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 ABT1Q9ULW3 272 aaKnown RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 PAM16Q9Y3D7 125 aa4.08□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM184BQ9Y519 407 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-210ENST00000547654 EP400Q96L91 3159 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 A0A1W2PPQ1 181 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 CLRN2A0PK11 232 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 FAM149AA5PLN7 773 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 CFAP73A6NFT4 308 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 J3QR06 171 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 ACOT8O14734 319 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PLGP00747 810 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 IFNA2P01563 188 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 TPBGLP0DKB5 382 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SAGP10523 405 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 FGF3P11487 239 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 NR1D1P20393 614 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 CCND2P30279 289 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 HSD17B3P37058 310 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PIGAP37287 484 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 LHX1P48742 406 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 RGS7P49802 495 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 POLR2LP62875 67 aaKnown RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 ST3GAL1Q11201 340 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PTGR1Q14914 329 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SYT16Q17RD7 645 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 C6orf10Q5SRN2 563 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 MFSD12Q6NUT3 480 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 DUS1LQ6P1R4 473 aaKnown RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 ZCCHC12Q6PEW1 402 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PODNL1Q6PEZ8 512 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PSRC1Q6PGN9 363 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 TMPRSS11FQ6ZWK6 438 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SHFQ7M4L6 423 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PRSS42Q7Z5A4 293 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 NRARPQ7Z6K4 114 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 PM20D2Q8IYS1 436 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms