RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 C2orf73Q8N5S3 287 aaPredicted RBP16.23■□□□□ 0.19
CCDC38-203ENST00000546803 LMNTD1Q8N9Z9 388 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 UHMK1Q8TAS1 419 aaKnown RBP16.23■□□□□ 0.19
CCDC38-203ENST00000546803 ZNF480Q8WV37 535 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 ANKRD49Q8WVL7 239 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 FGF11Q92914 225 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 TRAPPC9Q96Q05 1148 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 CCDC77Q9BR77 488 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 CHRNA10Q9GZZ6 450 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 PDE7BQ9NP56 450 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 INTS7Q9NVH2 962 aaKnown RBP16.23■□□□□ 0.19
CCDC38-203ENST00000546803 SOHLH2Q9NX45 425 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 FETUBQ9UGM5 382 aa16.23■□□□□ 0.19
CCDC38-203ENST00000546803 UNC13CQ8NB66 2214 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 HMX2A2RU54 273 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 E7ENX8 843 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 KRT38O76015 456 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 MSL3P1P0C860 447 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 CCDC166P0CW27 439 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 ST6GAL1P15907 406 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 CD82P27701 267 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 SLC5A2P31639 672 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 TAP2Q03519 686 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 FOXM1Q08050 763 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 FASTKQ14296 549 aaKnown RBP16.22■□□□□ 0.19
CCDC38-203ENST00000546803 SLC29A2Q14542 456 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 NAA25Q14CX7 972 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 PHKG1Q16816 387 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 ERCC6LQ2NKX8 1250 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 LGSNQ5TDP6 509 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 SBSNQ6UWP8 590 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 SYTL1Q8IYJ3 562 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 SNIP1Q8TAD8 396 aaKnown RBP16.22■□□□□ 0.19
CCDC38-203ENST00000546803 ZCCHC14Q8WYQ9 949 aaKnown RBP16.22■□□□□ 0.19
CCDC38-203ENST00000546803 TCTN2Q96GX1 697 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 UBXN10Q96LJ8 280 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
CCDC38-203ENST00000546803 CTNNAL1Q9UBT7 734 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 ACSL6Q9UKU0 697 aa16.22■□□□□ 0.19
CCDC38-203ENST00000546803 A0A087X1B8 175 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 A0A1W2PPV9 198 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 C9orf172C9J069 976 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 CDC7O00311 574 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 SLC35E2BP0CK96 405 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 PVRP15151 417 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 FOLR1P15328 257 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 IMPA1P29218 277 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 SERPINB8P50452 374 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 SH3BP2P78314 561 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 BMPR2Q13873 1038 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 EMBQ6PCB8 327 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 CMC1Q7Z7K0 106 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 TBC1D1Q86TI0 1168 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 TRIM73Q86UV7 250 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 C19orf47Q8N9M1 422 aaKnown RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 OR2A1Q8NGT9 310 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 OR8K5Q8NH50 307 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 DCAKDQ8WVC6 231 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 UBLCP1Q8WVY7 318 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 ATL1Q8WXF7 558 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 FCRL4Q96PJ5 515 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 OR6C1Q96RD1 312 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 PCBD2Q9H0N5 130 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 EPB41L4BQ9H329 900 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 FGF21Q9NSA1 209 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 ARL15Q9NXU5 204 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 STOX2Q9P2F5 926 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 TLK1Q9UKI8 766 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 ACOT9Q9Y305 439 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 KLK4Q9Y5K2 254 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 B3GALT1Q9Y5Z6 326 aa16.21■□□□□ 0.19
CCDC38-203ENST00000546803 V9GYY5 206 aaPredicted RBP16.21■□□□□ 0.19
CCDC38-203ENST00000546803 CCDC189A1A4V9 331 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 NPEPPSL1A6NEC2 478 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 TARM1B6A8C7 271 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 KRT37O76014 449 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CCNDBP1O95273 360 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 C2P06681 752 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 EBLN1P0CF75 366 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 FGF5P12034 268 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CCND1P24385 295 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 TYK2P29597 1187 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CMPK1P30085 196 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CSRP3P50461 194 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CDKL1Q00532 357 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 TUBB3Q13509 450 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 CSHL1Q14406 222 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 KCNAB1Q14722 419 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 TSNQ15631 228 aaKnown RBP16.2■□□□□ 0.18
CCDC38-203ENST00000546803 PPP1R3AQ16821 1122 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 TAF1BQ53T94 588 aaPredicted RBP16.2■□□□□ 0.18
CCDC38-203ENST00000546803 AGTRAPQ6RW13 159 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
CCDC38-203ENST00000546803 LRRC56Q8IYG6 542 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms