RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 XKR5Q6UX68 686 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 TMIEQ8NEW7 156 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 HMGB4Q8WW32 186 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 LRRC58Q96CX6 371 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
CCDC38-202ENST00000546386 UHRF1Q96T88 793 aaPredicted RBP11.62□□□□□ -0.55
CCDC38-202ENST00000546386 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 AIG1Q9NVV5 245 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 NDE1Q9NXR1 346 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 GPSM3Q9Y4H4 160 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 CCL27Q9Y4X3 112 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 SLCO1B1Q9Y6L6 691 aa11.62□□□□□ -0.55
CCDC38-202ENST00000546386 MAGEB17A8MXT2 336 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 NVLO15381 856 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 NUAK1O60285 661 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 DFNA5O60443 496 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 IDO1P14902 403 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 NELFEP18615 380 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PTGER1P34995 402 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PRLHRP49683 370 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 AP2B1P63010 937 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 IRF4Q15306 451 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 MAP7D1Q3KQU3 841 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 LDLRAP1Q5SW96 308 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ARMC3Q5W041 872 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ICE2Q659A1 982 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 SLC15A3Q8IY34 581 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 MMP21Q8N119 569 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ZNF557Q8N988 423 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 SEPHS2Q99611 448 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 STX18Q9P2W9 335 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 MTCH2Q9Y6C9 303 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 SCN3AQ9NY46 2000 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 NCOR1O75376 2440 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PCM1Q15154 2024 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 A0A1W2PQF6 199 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 TXNDC9O14530 226 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 LILRB5O75023 590 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 TIPRLO75663 272 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 HOXB3P14651 431 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 SLC6A2P23975 617 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 AK4P27144 223 aaPredicted RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 OXTRP30559 389 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 TBPL1P62380 186 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PHC1P78364 1004 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 CDK3Q00526 305 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ELP6Q0PNE2 266 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 EIF4HQ15056 248 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 SFT2D3Q587I9 215 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PRAMEF14Q5SWL7 426 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 TPRG1LQ5T0D9 272 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 C11orf96Q7Z7L8 435 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ENDOVQ8N8Q3 282 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 PPWD1Q96BP3 646 aaKnown RBP11.61□□□□□ -0.55
CCDC38-202ENST00000546386 HIC2Q96JB3 615 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 ASB2Q96Q27 587 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 INPP5KQ9BT40 448 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 C1QTNF3Q9BXJ4 246 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 OR51B5Q9H339 312 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 LRTM1Q9HBL6 345 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 TRIM39Q9HCM9 518 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
CCDC38-202ENST00000546386 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SLC5A10A0PJK1 596 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 TSPAN11A1L157 253 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 AGRPO00253 132 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 NPC1O15118 1278 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 MATN4O95460 622 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SERPIND1P05546 499 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 UBTFL6P0CB48 400 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 BCKDHAP12694 445 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 TCF3P15923 654 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 CD9P21926 228 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 AQP4P55087 323 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 RPS14P62263 151 aaKnown RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SGCGQ13326 291 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 GK3PQ14409 553 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 OR7A2PQ8NGA2 310 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 DNAJC9Q8WXX5 260 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 LRTOMTQ8WZ04 291 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 TSACCQ96A04 125 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 ELSPBP1Q96BH3 223 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 PKP2Q99959 881 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 KLHL25Q9H0H3 589 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SGK2Q9HBY8 427 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SLC52A3Q9NQ40 469 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 RIC8BQ9NVN3 520 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 SNX13Q9Y5W8 968 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 MYOCOSA0A1B0GUC4 107 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 WASHC1A8K0Z3 465 aa11.6□□□□□ -0.55
CCDC38-202ENST00000546386 RTCAO00442 366 aaKnown RBP11.6□□□□□ -0.55
CCDC38-202ENST00000546386 PPM1DO15297 605 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms