RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CA12O43570 354 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ATP6V1G1O75348 118 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 SULT1C4O75897 302 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ANGPTL1O95841 491 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 IGFBP5P24593 272 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 CCR7P32248 378 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 RELAQ04206 551 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 DGCR6Q14129 220 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 CPZQ66K79 652 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 SLC8B1Q6J4K2 584 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 VTCN1Q7Z7D3 282 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 FAR1Q8WVX9 515 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 CLSTN3Q9BQT9 956 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 KCNH6Q9H252 994 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 PCDH12Q9NPG4 1184 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ENPP5Q9UJA9 477 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ERGIC3Q9Y282 383 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 PIKFYVEQ9Y2I7 2098 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 A0A1W2PQ67 120 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 NPIPB15A6NHN6 443 aaPredicted RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 FAM220BPB1ANY3 271 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ERN1O75460 977 aaKnown RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 KRT6AP02538 564 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 KRT6BP04259 564 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 SLC10A3P09131 477 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 SDC1P18827 310 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 KRT6CP48668 564 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 DAPP51397 102 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 CD300CQ08708 224 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 EPS8Q12929 822 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 PERM1Q5SV97 790 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 TXNDC8Q6A555 127 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 KIAA1841Q6NSI8 718 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ZCCHC8Q6NZY4 707 aaKnown RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 NXPE1Q8N323 547 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 TMEM132CQ8N3T6 1108 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ARL14EPQ8N8R7 260 aaPredicted RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 NDNFQ8TB73 568 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 CHPT1Q8WUD6 406 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 SH3YL1Q96HL8 342 aaPredicted RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 DPH2Q9BQC3 489 aaPredicted RBP15.39■□□□□ 0.05
LDLR-204ENST00000545707 ELOVL6Q9H5J4 265 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 FAM8A1Q9UBU6 413 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ERVK-11Q9UQG0 969 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 ORC6Q9Y5N6 252 aa15.39■□□□□ 0.05
LDLR-204ENST00000545707 TRBV5-4A0A0C4DH59 114 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ZNF99A8MXY4 864 aaPredicted RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 PRAMEF4O60810 478 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 SH3BGRLO75368 114 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 WDR47O94967 919 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ANXA5P08758 320 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ITPKAP23677 461 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 CD6P30203 668 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 BCAP31P51572 246 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 CLDN8P56748 225 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 GABARAPL2P60520 117 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 B4GALNT1Q00973 533 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 FPGSQ05932 587 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ELAVL2Q12926 359 aaKnown RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 PRAMEF9Q5VWM5 478 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 B3GNT8Q7Z7M8 397 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 VRK3Q8IV63 474 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 OR7A2PQ8NGA2 310 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 CDC26Q8NHZ8 85 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ADAMTS19Q8TE59 1207 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 STARD7Q9NQZ5 370 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 TRNAU1APQ9NX07 287 aaKnown RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 A0A096LPI6 279 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 A0A1W2PQ45 241 aaPredicted RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 A0A1W2PQY0 241 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 RFXANKO14593 260 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 SLC16A6O15403 523 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 IMPDH2P12268 514 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 CD97P48960 835 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 CLK3P49761 638 aaKnown RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 VBP1P61758 197 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 AP1S1P61966 158 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 NPTX1Q15818 432 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 RGS21Q2M5E4 152 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 ATP13A5Q4VNC0 1218 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 LRIF1Q5T3J3 769 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 NEK5Q6P3R8 708 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 MACC1Q6ZN28 852 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 TPGS1Q6ZTW0 290 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 UBE2R2Q712K3 238 aaPredicted RBP15.38■□□□□ 0.05
LDLR-204ENST00000545707 SLCO6A1Q86UG4 719 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 HIPK1Q86Z02 1210 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 PIK3C3Q8NEB9 887 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 SLC32A1Q9H598 525 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 MTRRQ9UBK8 725 aa15.38■□□□□ 0.05
LDLR-204ENST00000545707 MTX2O75431 263 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 RECQL5O94762 991 aaPredicted RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 SELPP16109 830 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 ITIH1P19827 911 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 TGFBR1P36897 503 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 SPAM1P38567 509 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 STK19P49842 368 aaPredicted RBP15.37■□□□□ 0.05
LDLR-204ENST00000545707 CBX3Q13185 183 aa15.37■□□□□ 0.05
LDLR-204ENST00000545707 GBX1Q14549 363 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms