RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 ZNF599Q96NL3 588 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 RPRD1AQ96P16 312 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 SORT1Q99523 831 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 ZBTB18Q99592 522 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 MLPHQ9BV36 600 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 OSBPL11Q9BXB4 747 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 SHCBP1LQ9BZQ2 653 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 MKRN2Q9H000 416 aaKnown RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 DUSP15Q9H1R2 295 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 ZBTB26Q9HCK0 441 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 NT5MQ9NPB1 228 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 STARD5Q9NSY2 213 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 CATSPERZQ9NTU4 200 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 INTS10Q9NVR2 710 aaKnown RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 TMEM248Q9NWD8 314 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 ELOVL2Q9NXB9 296 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 TAS2R13Q9NYV9 303 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 USP36Q9P275 1121 aaKnown RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 DEC1Q9P2X7 70 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 SFMBT1Q9UHJ3 866 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 MBD1Q9UIS9 605 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 CNOT11Q9UKZ1 510 aaKnown RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 EMCNQ9ULC0 261 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 RNF112Q9ULX5 631 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 NDRG2Q9UN36 371 aaKnown RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 HIF3AQ9Y2N7 669 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 AP3M1Q9Y2T2 418 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 VWA7Q9Y334 891 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 MFHAS1Q9Y4C4 1052 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 TRAF6Q9Y4K3 522 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 AP4S1Q9Y587 144 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 ANGPTL3Q9Y5C1 460 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 SVILO95425 2214 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 RP1L1Q8IWN7 2480 aaPredicted RBP3.53□□□□□ -1.84
LINC01965-204ENST00000545549 TRPM6Q9BX84 2022 aa3.53□□□□□ -1.84
LINC01965-204ENST00000545549 ICE1Q9Y2F5 2266 aa3.53□□□□□ -1.85
LINC01965-204ENST00000545549 AKAP9Q99996 3911 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NBASA2RRP1 2371 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RNF103-CHMP3A0A140T963 221 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 UBA6A0AVT1 1052 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PRAMEF27A3QJZ7 478 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SUPT3HB4E1H0 165 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 WASH3PC4AMC7 463 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FAM72CH0Y354 149 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 H3BNX3 289 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GOLGA8TH3BQL2 631 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 IFRD1O00458 451 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 AZIN1O14977 448 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GSTA4O15217 222 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CD3EAPO15446 510 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 AKAP10O43572 662 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DENRO43583 198 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NRP2O60462 931 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DLX3O60479 287 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DNAJA2O60884 412 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ATG13O75143 517 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SUPT3HO75486 399 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GJB3O75712 270 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 BCAS2O75934 225 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RHOBTB1O94844 696 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 APBB3O95704 486 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RECKO95980 971 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PEX11BO96011 259 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MT-CYBP00156 380 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NPPAP01160 153 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SLC4A1P02730 911 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 F13BP05160 661 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HLA-DQB2P05538 268 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CHRNGP07510 517 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LINGO3P0C6S8 592 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SLC35E2BP0CK96 405 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 UMPSP11172 480 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HLA-EP13747 358 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GABRG2P18507 467 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NTSR1P30989 418 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CD70P32970 193 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TTKP33981 857 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NTF4P34130 210 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CPOXP36551 454 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TTPAP49638 278 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RGS4P49798 205 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DGKEP52429 567 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NR1H2P55055 460 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 OXCT1P55809 520 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PSME3P61289 254 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RPS26P62854 115 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HERVK_113P63132 956 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MRPS22P82650 360 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MPP1Q00013 466 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CREB5Q02930 508 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 BTKQ06187 659 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FOXM1Q08050 763 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GRSF1Q12849 480 aaKnown RBP eCLIP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LMAN2Q12907 356 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 EPS8Q12929 822 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GRIK2Q13002 908 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms