RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ANXA8P13928 327 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 OPRL1P41146 370 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SOX10P56693 466 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CLCQ05315 142 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SPP2Q13103 211 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TRAPPC5Q8IUR0 188 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CNIH3Q8TBE1 160 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CCDC74BQ96LY2 380 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CRB3Q9BUF7 120 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 MRPL15Q9P015 296 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 FBXO5Q9UKT4 447 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TCRBV7S2A1N4TA0A589 114 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 HLA-DPB1P04440 258 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 MAPTP10636 758 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 LHX1P48742 406 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TMEM119Q4V9L6 283 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TMEM126BQ8IUX1 230 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 AP2M1Q96CW1 435 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 POLR2J3Q9H1A7 115 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CDT1Q9H211 546 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 BRD9Q9H8M2 597 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 UNKLQ9H9P5 680 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 MS4A12Q9NXJ0 267 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TNFRSF10DQ9UBN6 386 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF70Q9UC06 446 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NUP153P49790 1475 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NRKQ7Z2Y5 1582 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 OR7A17O14581 309 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 FMO1Q01740 532 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SLC26A9Q7LBE3 791 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 LGI4Q8N135 537 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF565Q8N9K5 539 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 LGMNQ99538 433 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TMPRSS4Q9NRS4 437 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SCAMP3O14828 347 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 HBP1O60381 514 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TXNDC12O95881 172 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CDK1P06493 297 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PTGIRP43119 386 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF132P52740 706 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 DSTNP60981 165 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 C2orf80Q0P641 193 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NFATC3Q12968 1075 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 RFTN2Q52LD8 501 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 XRRA1Q6P2D8 792 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 C16orf59Q7L2K0 433 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 VWA5B2Q8N398 1253 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 C12orf45Q8N5I9 185 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 DNASE1L2Q92874 299 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 VRK1Q99986 396 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TRIM36Q9NQ86 728 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 DLGAP4Q9Y2H0 992 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PCDHGB7Q9Y5F8 929 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 MYPNQ86TC9 1320 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SAMD9Q5K651 1589 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 A8MU76 341 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 M0R129 80 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 BHLHE40O14503 412 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PCDH17O14917 1159 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PCDH8O95206 1070 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SNRNP70P08621 437 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 USP17L7P0C7H9 530 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 JUPP14923 745 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 GOT1P17174 413 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 HUNKP57058 714 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 RNF4P78317 190 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PMS2P3Q13401 168 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NTRK2Q16620 822 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 FBXO48Q5FWF7 155 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 LGI2Q8N0V4 545 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PARK7Q99497 189 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 POLHQ9Y253 713 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PCDHB5Q9Y5E4 795 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 AP1M2Q9Y6Q5 423 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 HMX3A6NHT5 357 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 KIAA0513O60268 411 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 IGSF6O95976 241 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 FDX1P10109 184 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 CCND3P30281 292 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PPP1R8Q12972 351 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 GTF2H2Q13888 395 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 C11orf91Q3C1V1 193 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TKFCQ3LXA3 575 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PRPF38BQ5VTL8 546 aaKnown RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 GTF2H2CQ6P1K8 395 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 NLRP8Q86W28 1048 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TTLL6Q8N841 843 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 OR6K6Q8NGW6 343 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 TESCQ96BS2 214 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 PRICKLE1Q96MT3 831 aaPredicted RBP8.45□□□□□ -1.06
ATXN3-216ENST00000545170 WASH6PQ9NQA3 447 aa8.45□□□□□ -1.06
ATXN3-216ENST00000545170 SALL1Q9NSC2 1324 aa8.44□□□□□ -1.06
ATXN3-216ENST00000545170 GRID2O43424 1007 aa8.44□□□□□ -1.06
ATXN3-216ENST00000545170 ALDOBP05062 364 aa8.44□□□□□ -1.06
ATXN3-216ENST00000545170 RPS17P08708 135 aaKnown RBP8.44□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF20P17024 532 aa8.44□□□□□ -1.06
ATXN3-216ENST00000545170 TGM4P49221 684 aa8.44□□□□□ -1.06
ATXN3-216ENST00000545170 IKBKEQ14164 716 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms