RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
DDX11-227ENST00000544652 TMCO1Q9UM00 188 aa12.67□□□□□ -0.38
DDX11-227ENST00000544652 ZNF292O60281 2723 aa12.67□□□□□ -0.38
DDX11-227ENST00000544652 A0A1W2PPV9 198 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 PABPN1LA6NDY0 278 aaKnown RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 HMGB1P1B2RPK0 211 aaPredicted RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 MATN2O00339 956 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 TAPBPO15533 448 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 SPAG7O75391 227 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 GUCA1CO95843 209 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 PROS1P07225 676 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 CHRM5P08912 532 aaPredicted RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 CEACAM1P13688 526 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 SDHBP21912 280 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 CD1CP29017 333 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 ALDH4A1P30038 563 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 PEBP1P30086 187 aaKnown RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 ETV4P43268 484 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 CAPZBP47756 277 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 SLC6A12P48065 614 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 MAGOHP61326 146 aaKnown RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 NFKB2Q00653 900 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 CFHR1Q03591 330 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 FASTKQ14296 549 aaKnown RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 KLHL35Q6PF15 583 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 WDR74Q6RFH5 385 aaPredicted RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 AGTRAPQ6RW13 159 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 OOSP2Q86WS3 158 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 OR56A3Q8NH54 315 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 WDR48Q8TAF3 677 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 RDH11Q8TC12 318 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 RSC1A1Q92681 617 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 TMEM79Q9BSE2 394 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 SGPP1Q9BX95 441 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 LRRN3Q9H3W5 708 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 CDV3Q9UKY7 258 aaKnown RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 ENTPD2Q9Y5L3 495 aa12.66□□□□□ -0.38
DDX11-227ENST00000544652 EP300Q09472 2414 aaPredicted RBP12.66□□□□□ -0.38
DDX11-227ENST00000544652 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 PIPSLA2A3N6 862 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 OR6C74A6NCV1 312 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SUPT3HB4E1H0 165 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 G3V2L1 256 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 STX16-NPEPL1H3BU86 382 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 STX16O14662 325 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 TM9SF1O15321 606 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 DUX1O43812 170 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SUPT3HO75486 399 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 RFPL3O75679 317 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 C9P02748 559 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 CDK4P11802 303 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 AMD1P17707 334 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 CCND1P24385 295 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 CSF2RBP32927 897 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 RPA3P35244 121 aaPredicted RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 ALDH18A1P54886 795 aaKnown RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 CCL7P80098 99 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 E2F1Q01094 437 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 KIR2DS3Q14952 304 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 LMNTD1Q8N9Z9 388 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 PPFIBP2Q8ND30 876 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 UBTD2Q8WUN7 234 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 EGFL8Q99944 293 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 DPYSL5Q9BPU6 564 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 RTKNQ9BST9 563 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 C12orf65Q9H3J6 166 aaKnown RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 HRASLS2Q9NWW9 162 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SPHK1Q9NYA1 384 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 CD274Q9NZQ7 290 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 CPSF2Q9P2I0 782 aaKnown RBP12.65□□□□□ -0.38
DDX11-227ENST00000544652 PDP2Q9P2J9 529 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
DDX11-227ENST00000544652 NCF1BA6NI72 391 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 A8MT66 165 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 NCF1CA8MVU1 366 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 C2orf74A8MZ97 194 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 CASC3O15234 703 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 DLX3O60479 287 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 SMIM24O75264 130 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 IPO13O94829 963 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 ZWINTO95229 277 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 CPNE6O95741 557 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 S100BP04271 92 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 RPLP0P05388 317 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 NCF1P14598 390 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 TYRP1P17643 537 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 POLR2CP19387 275 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 ATP5F1P24539 256 aaPredicted RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 OAS2P29728 719 aaKnown RBP12.64□□□□□ -0.39
DDX11-227ENST00000544652 TBPL1P62380 186 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 MPP2Q14168 576 aa12.64□□□□□ -0.39
DDX11-227ENST00000544652 PCBP2Q15366 365 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX11-227ENST00000544652 RSPO4Q2I0M5 234 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms