RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 CNPPD1Q9BV87 410 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 SNTG1Q9NSN8 517 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 MN1Q10571 1320 aaPredicted RBP12.54□□□□□ -0.4
PDZD4-209ENST00000544474 NUMA1Q14980 2115 aa12.54□□□□□ -0.4
PDZD4-209ENST00000544474 TRAV19A0A0A6YYK7 116 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 AGAP5A6NIR3 686 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 HNRNPCL2B2RXH8 293 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TEX46H3BTG2 121 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 J3KR12 359 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 F9P00740 461 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PGRP06401 933 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 DNAJB1P25685 340 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PNPLA4P41247 253 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 INTS6LQ5JSJ4 861 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF517Q6ZMY9 492 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 OR10Z1Q8NGY1 313 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ZBTB18Q99592 522 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 UCK2Q9BZX2 261 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 KAT8Q9H7Z6 458 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ERVMER34-1Q9H9K5 563 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 MRPL39Q9NYK5 338 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 DERAQ9Y315 318 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 CLCA3PQ9Y6N3 262 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 I3L521 148 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SRP54P61011 504 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PTPRNQ16849 979 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ZMAT1Q5H9K5 638 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SPANXN4Q5MJ08 99 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 OTUD1Q5VV17 481 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GHDCQ8N2G8 530 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GLB1L3Q8NCI6 653 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TOE1Q96GM8 510 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GPR21Q99679 349 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 POLR3BQ9NW08 1133 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ASB1Q9Y576 335 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SMIM28A0A1B0GU29 152 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PDHXO00330 501 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PLD2O14939 933 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GLP2RO95838 553 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 MYL3P08590 195 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 RAP2AP10114 183 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 INPP1P49441 399 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 CRISP3P54108 245 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 LRRC74AQ0VAA2 488 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 LCN8Q6JVE9 175 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TLK2Q86UE8 772 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TTC29Q8NA56 475 aaPredicted RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 NTAN1Q96AB6 310 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 MMP27Q9H306 513 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 IKZF5Q9H5V7 419 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 ANKHQ9HCJ1 492 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
PDZD4-209ENST00000544474 SARDHQ9UL12 918 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 PCDHGA10Q9Y5H3 936 aa12.53□□□□□ -0.4
PDZD4-209ENST00000544474 NIPSNAP2O75323 286 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 SLC25A27O95847 323 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 SLC2A3P11169 496 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 CLCN5P51795 746 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 SLC10A7Q0GE19 358 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 SLAMF1Q13291 335 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 GRIK4Q16099 956 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 BLOC1S3Q6QNY0 202 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 CLEC20AQ6ZU45 233 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 GLCCI1Q86VQ1 547 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 DEDD2Q8WXF8 326 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.4
PDZD4-209ENST00000544474 LRRC3Q9BY71 257 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 LATS2Q9NRM7 1088 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 KCNE2Q9Y6J6 123 aa12.52□□□□□ -0.4
PDZD4-209ENST00000544474 MGAMO43451 1857 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 ZNF254O75437 659 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 PSIP1O75475 530 aaKnown RBP12.52□□□□□ -0.41
PDZD4-209ENST00000544474 LIPAP38571 399 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 AIF1P55008 147 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 HERVK_113P63132 956 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 IL18R1Q13478 541 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 TIGD6Q17RP2 521 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 PTCHD3Q3KNS1 767 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 HACD2Q6Y1H2 254 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 PARP16Q8N5Y8 322 aa12.52□□□□□ -0.41
PDZD4-209ENST00000544474 SIDT2Q8NBJ9 832 aaKnown RBP12.52□□□□□ -0.41
PDZD4-209ENST00000544474 C2CD4AQ8NCU7 369 aaPredicted RBP12.52□□□□□ -0.41
PDZD4-209ENST00000544474 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms