RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 GABRA4P48169 554 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 FASTKQ14296 549 aaKnown RBP18.45■□□□□ 0.54
DDX55-211ENST00000544429 KCNAB1Q14722 419 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 ZIC1Q15915 447 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 PHKG1Q16816 387 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 PPP1R3AQ16821 1122 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 TMEM164Q5U3C3 297 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 SBSNQ6UWP8 590 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 TRIM73Q86UV7 250 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 RAB42Q8N4Z0 105 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 ZNF480Q8WV37 535 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 UBXN10Q96LJ8 280 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 OR6C1Q96RD1 312 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 CAB39LQ9H9S4 337 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 SYTL2Q9HCH5 934 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.45■□□□□ 0.54
DDX55-211ENST00000544429 LNPEPQ9UIQ6 1025 aa18.45■□□□□ 0.54
DDX55-211ENST00000544429 KMT2BQ9UMN6 2715 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 PKD1L2Q7Z442 2459 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 SRRM3A6NNA2 597 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 ISM1B1AKI9 464 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 E7ENX8 843 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 EBLN1P0CF75 366 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 IMPA1P29218 277 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 OAS2P29728 719 aaKnown RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 PNLIPRP1P54315 467 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 TUBB4BP68371 445 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 TAP2Q03519 686 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 CEACAM20Q6UY09 585 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 TRMT10CQ7L0Y3 403 aaKnown RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 BPHLQ86WA6 291 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 NKAPQ8N5F7 415 aaKnown RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 C2orf73Q8N5S3 287 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 C19orf47Q8N9M1 422 aaKnown RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 ZNF248Q8NDW4 579 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 ZNF501Q96CX3 271 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 TSPAN17Q96FV3 270 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 FCRL4Q96PJ5 515 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 EPB41L4BQ9H329 900 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 GPAMQ9HCL2 828 aa18.44■□□□□ 0.54
DDX55-211ENST00000544429 NOVA2Q9UNW9 492 aaKnown RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 TMEM184BQ9Y519 407 aaPredicted RBP18.44■□□□□ 0.54
DDX55-211ENST00000544429 H3BMH7 237 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 SLU7O95391 586 aaKnown RBP18.43■□□□□ 0.54
DDX55-211ENST00000544429 STMN1P16949 149 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 SAT1P21673 171 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 MAP4P27816 1152 aaKnown RBP18.43■□□□□ 0.54
DDX55-211ENST00000544429 ACY1Q03154 408 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 TUBB3Q13509 450 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 USP10Q14694 798 aaKnown RBP18.43■□□□□ 0.54
DDX55-211ENST00000544429 ST3GAL2Q16842 350 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 ZXDCQ2QGD7 858 aaPredicted RBP18.43■□□□□ 0.54
DDX55-211ENST00000544429 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDX55-211ENST00000544429 CYB5D1Q6P9G0 228 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 CDHR3Q6ZTQ4 885 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 MCOLN3Q8TDD5 553 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.43■□□□□ 0.54
DDX55-211ENST00000544429 SMPDL3AQ92484 453 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 TCTN2Q96GX1 697 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 CCDC138Q96M89 665 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 CTRCQ99895 268 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 FAM60AQ9NP50 221 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 FGF21Q9NSA1 209 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 PILRAQ9UKJ1 303 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 PCDHB11Q9Y5F2 797 aa18.43■□□□□ 0.54
DDX55-211ENST00000544429 PHGDHO43175 533 aaKnown RBP18.42■□□□□ 0.54
DDX55-211ENST00000544429 RIPK2O43353 540 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 DLGAP3O95886 979 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 ENO2P09104 434 aaPredicted RBP18.42■□□□□ 0.54
DDX55-211ENST00000544429 SLC35E2BP0CK96 405 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 CYP2A7P20853 494 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 PSMB5P28074 263 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 PMS2P54278 862 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 AP1S2P56377 157 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 RAB10P61026 200 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 CLN3Q13286 438 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 KIAA1614Q5VZ46 1190 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 TAX1BP1Q86VP1 789 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 FAM20CQ8IXL6 584 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 GSPT2Q8IYD1 628 aaKnown RBP18.42■□□□□ 0.54
DDX55-211ENST00000544429 OR2L3Q8NG85 312 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 OR8K5Q8NH50 307 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 DHRS4Q9BTZ2 278 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 DPH1Q9BZG8 443 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 DERL2Q9GZP9 239 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 PDE7BQ9NP56 450 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 ENAMQ9NRM1 1142 aa18.42■□□□□ 0.54
DDX55-211ENST00000544429 STOX2Q9P2F5 926 aaPredicted RBP18.42■□□□□ 0.54
DDX55-211ENST00000544429 PTPRQQ9UMZ3 2332 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 A0A087WUV0 522 aaPredicted RBP18.41■□□□□ 0.54
DDX55-211ENST00000544429 ZNF839A8K0R7 811 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 CDC7O00311 574 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 HCRTR1O43613 425 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 TIAF1O95411 115 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 LIPCP11150 499 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 MAGP20916 626 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 DEKP35659 375 aaKnown RBP18.41■□□□□ 0.54
DDX55-211ENST00000544429 SLC12A2P55011 1212 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 FOXM1Q08050 763 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms