RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ACAP2Q15057 778 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 CACHD1Q5VU97 1274 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 KLC3Q6P597 504 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 SPESP1Q6UW49 350 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 SUSD1Q6UWL2 747 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 CLEC14AQ86T13 490 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 FLVCR1-AS1Q8TAF5 88 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 STAG3L4Q8TBR4 150 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 SMPDL3AQ92484 453 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 EXT2Q93063 718 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 PPM1MQ96MI6 270 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 TSNARE1Q96NA8 513 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 GPR78Q96P69 363 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 OR2A14Q96R47 310 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 CD180Q99467 661 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 MAP3K3Q99759 626 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 EGFL8Q99944 293 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 STRADBQ9C0K7 418 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 ZNF358Q9NW07 568 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 RNF112Q9ULX5 631 aa13.17□□□□□ -0.3
SP140-213ENST00000543928 A0A1W2PPV9 198 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 TLCD2A6NGC4 264 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 NCF1BA6NI72 391 aaPredicted RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 NCF1CA8MVU1 366 aaPredicted RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 AGRPO00253 132 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 KERAO60938 352 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ANXA5P08758 320 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 NCF1P14598 390 aaPredicted RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 CDH3P22223 829 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 PSMB5P28074 263 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 OAS2P29728 719 aaKnown RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 KCNC1P48547 511 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 SEPHS1P49903 392 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 CDKL1Q00532 357 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 C16orf72Q14CZ0 275 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 TGFBIQ15582 683 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 TSNAXIP1Q2TAA8 658 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 CEP85LQ5SZL2 805 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 AGTRAPQ6RW13 159 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 PRSS42Q7Z5A4 293 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 TRIM73Q86UV7 250 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 LRRC56Q8IYG6 542 aaPredicted RBP13.16□□□□□ -0.3
SP140-213ENST00000543928 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 FBXL8Q96CD0 374 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 GRAMD1AQ96CP6 724 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ATG10Q9H0Y0 220 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 KLK13Q9UKR3 277 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
SP140-213ENST00000543928 IGHV5-51A0A0C4DH38 117 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 CCDC189A1A4V9 331 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 SUPT3HB4E1H0 165 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 TOX3O15405 576 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 SUPT3HO75486 399 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ADRB1P08588 477 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ANKRD34CP0C6C1 535 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 PVRP15151 417 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 SPINK2P20155 84 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 RPA3P35244 121 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 LSSP48449 732 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 TBPL1P62380 186 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 NAE1Q13564 534 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 CASP8Q14790 479 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 SF1Q15637 639 aaKnown RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ZXDCQ2QGD7 858 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 TECRLQ5HYJ1 363 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 LRIG3Q6UXM1 1119 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 SH2D5Q6ZV89 423 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 RHEBL1Q8TAI7 183 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ATL1Q8WXF7 558 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ALKBH8Q96BT7 664 aaKnown RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 MED8Q96G25 268 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 LIN37Q96GY3 246 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 SCYL1Q96KG9 808 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ACAT2Q9BWD1 397 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 KLHL25Q9H0H3 589 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 ZNF768Q9H5H4 540 aaKnown RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 CCDC177Q9NQR7 707 aaPredicted RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 C1GALT1Q9NS00 363 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 CD274Q9NZQ7 290 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 WASF3Q9UPY6 502 aa13.15□□□□□ -0.3
SP140-213ENST00000543928 SNRNP200O75643 2136 aaKnown RBP13.15□□□□□ -0.3
SP140-213ENST00000543928 PCM1Q15154 2024 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 CCDC187A0A096LP49 1063 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 A0A0J9YY10 115 aa13.14□□□□□ -0.31
SP140-213ENST00000543928 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms