RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 GANABQ14697 944 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 CCDC36Q8IYA8 594 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 LGALS12Q96DT0 336 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 MEAF6Q9HAF1 191 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 THUMPD1Q9NXG2 353 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 ZNF282Q9UDV7 671 aaPredicted RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 CYTH4Q9UIA0 394 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 A0A1W2PRG6 482 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 TTC24A2A3L6 582 aaPredicted RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 GPR1P46091 355 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 TARBP2Q15633 366 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 MINDY1Q8N5J2 469 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 TMEM203Q969S6 136 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 RAD51AP1Q96B01 352 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 MTERF1Q99551 399 aaKnown RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 DHRS4Q9BTZ2 278 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 ASAH2Q9NR71 780 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 POLR3BQ9NW08 1133 aaPredicted RBP18.94■□□□□ 0.62
SUDS3-204ENST00000543473 SPATA7Q9P0W8 599 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 POFUT2Q9Y2G5 429 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 I3L521 148 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 DYRK3O43781 588 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 SLC6A4P31645 630 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 KLHL22Q53GT1 634 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 RAET1GQ6H3X3 334 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 OR4F3Q6IEY1 312 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 GOLM1Q8NBJ4 401 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 OR4F6Q8NGB9 312 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 POF1BQ8WVV4 589 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 FRMD6Q96NE9 622 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 NENFQ9UMX5 172 aa18.94■□□□□ 0.62
SUDS3-204ENST00000543473 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 A8MV72 311 aaPredicted RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 ADH1AP07327 375 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 PPM1AP35813 382 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 CDKL1Q00532 357 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 EMX2Q04743 252 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 GRB7Q14451 532 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 TECRLQ5HYJ1 363 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 RNF44Q7L0R7 432 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 RAVER1Q8IY67 606 aaKnown RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 KCTD13Q8WZ19 329 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 MIR1-1HGQ9H1L0 117 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 RHBGQ9H310 441 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 HSPB11Q9Y547 144 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 FUT4P22083 530 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 TLX1P31314 330 aaPredicted RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 CCDC157Q569K6 752 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 CMTR2Q8IYT2 770 aaKnown RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 ZNF433Q8N7K0 673 aaPredicted RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 C12orf4Q9NQ89 552 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 EIF3KQ9UBQ5 218 aaKnown RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 PCDHB3Q9Y5E6 796 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 HTR1EP28566 365 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 MAP2K4P45985 399 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 TARDBPQ13148 414 aaKnown RBP eCLIP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 CES5AQ6NT32 575 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 HACD2Q6Y1H2 254 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 ZFP3Q96NJ6 502 aa18.93■□□□□ 0.62
SUDS3-204ENST00000543473 PAK6Q9NQU5 681 aaPredicted RBP18.93■□□□□ 0.62
SUDS3-204ENST00000543473 HCRTO43612 131 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 ACSL4O60488 711 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 TFAP2AP05549 437 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 GUCA1AP43080 201 aaPredicted RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 SSR2P43308 183 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 CASP9P55211 416 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 CTC1Q2NKJ3 1217 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 C9orf64Q5T6V5 341 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 DSG4Q86SJ6 1040 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 GAB3Q8WWW8 586 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 THG1LQ9NWX6 298 aaKnown RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 LCHNA4D1U4 455 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 H3BMQ9 156 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 HLA-DQA2P01906 255 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 OPN1SWP03999 348 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 GTF2E2P29084 291 aaKnown RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 BIKQ13323 160 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 GRB14Q14449 540 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 C6orf136Q5SQH8 315 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 KHDRBS2Q5VWX1 349 aaKnown RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 MED27Q6P2C8 311 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 KRT77Q7Z794 578 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 COG8Q96MW5 612 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 STRA6Q9BX79 667 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 KCTD3Q9Y597 815 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 CORO1AP31146 461 aaKnown RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 ERVK-18Q9QC07 812 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 PCDHGA11Q9Y5H2 935 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 ZNF10P21506 573 aaPredicted RBP18.92■□□□□ 0.62
SUDS3-204ENST00000543473 CDH4P55283 916 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 GNG2P59768 71 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 MAB21L1Q13394 359 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 TBRG1Q3YBR2 411 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 IDNKQ5T6J7 187 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 BORAQ6PGQ7 559 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 ABHD11Q8NFV4 315 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 WDR48Q8TAF3 677 aa18.92■□□□□ 0.62
SUDS3-204ENST00000543473 KLHL6Q8WZ60 621 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms