RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 KDM1AO60341 852 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 KLHL41O60662 606 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 ZNF189O75820 626 aaPredicted RBP12.29□□□□□ -0.44
GPN3-203ENST00000543199 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
GPN3-203ENST00000543199 ITGAXP20702 1163 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 PKLRP30613 574 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 RAB28P51157 221 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 PLOD1Q02809 727 aaPredicted RBP12.29□□□□□ -0.44
GPN3-203ENST00000543199 HSPA14Q0VDF9 509 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 SHISA6Q6ZSJ9 500 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 VRK3Q8IV63 474 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 DNAAF3Q8N9W5 541 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 LINC01555Q8NAE3 123 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 TTC13Q8NBP0 860 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 OR13J1Q8NGT2 312 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 CFAP61Q8NHU2 1237 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 SLC6A20Q9NP91 592 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 SLC2A6Q9UGQ3 507 aa12.29□□□□□ -0.44
GPN3-203ENST00000543199 R3HDM2Q9Y2K5 976 aaKnown RBP12.29□□□□□ -0.44
GPN3-203ENST00000543199 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
GPN3-203ENST00000543199 A0A1B0GX78 115 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 GOT2P00505 430 aaKnown RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 TUBBP07437 444 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 MMP11P24347 488 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 MCM3P25205 808 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 CCR7P32248 378 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 GRIA3P42263 894 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 SOX8P57073 446 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 AIMP2Q13155 320 aaKnown RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 MCATQ8IVS2 390 aaKnown RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 METTL27Q8N6F8 245 aaPredicted RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 LKAAEAR1Q8TD35 194 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 DLG3Q92796 817 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 HDAC10Q969S8 669 aa12.28□□□□□ -0.44
GPN3-203ENST00000543199 CALR3Q96L12 384 aaKnown RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.28□□□□□ -0.44
GPN3-203ENST00000543199 CREBBPQ92793 2442 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 TCRBV7S2A1N4TA0A589 114 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 CCDC151A5D8V7 595 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 IQCF5A8MTL0 148 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 SOCS6O14544 535 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 PSMD3O43242 534 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 PYGBP11216 843 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 CD9P21926 228 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 PSMA3P25788 255 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 GCGRP47871 477 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 ARSFP54793 590 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 CDH17Q12864 832 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 KLF1Q13351 362 aaPredicted RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 NKG7Q16617 165 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 DNAJC21Q5F1R6 531 aaKnown RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 PRAMEF13Q5VWM6 474 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 AFTPHQ6ULP2 937 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 PEX26Q7Z412 305 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 LINC00523Q86TU6 105 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 SLC22A15Q8IZD6 547 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 CNDP1Q96KN2 507 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 ZNF778Q96MU6 729 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 TTC1Q99614 292 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 SPSB2Q99619 263 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 BARD1Q99728 777 aaKnown RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 MENTQ9BUN1 341 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 SOX17Q9H6I2 414 aaPredicted RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 AGPAT4Q9NRZ5 378 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 CTSFQ9UBX1 484 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 AMFRQ9UKV5 643 aa12.27□□□□□ -0.44
GPN3-203ENST00000543199 NOVA2Q9UNW9 492 aaKnown RBP12.27□□□□□ -0.44
GPN3-203ENST00000543199 MDC1Q14676 2089 aaKnown RBP12.27□□□□□ -0.45
GPN3-203ENST00000543199 ANKRD12Q6UB98 2062 aa12.27□□□□□ -0.45
GPN3-203ENST00000543199 ITPR2Q14571 2701 aa12.27□□□□□ -0.45
GPN3-203ENST00000543199 PCM1Q15154 2024 aa12.27□□□□□ -0.45
GPN3-203ENST00000543199 CELSR2Q9HCU4 2923 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 HEATR9A2RTY3 570 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 GAS8O95995 478 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 GRIA1P42261 906 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 EMP3P54852 163 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 SEMA3AQ14563 771 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 SF1Q15637 639 aaKnown RBP12.26□□□□□ -0.45
GPN3-203ENST00000543199 AGAP7PQ5VUJ5 663 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 IRAK1BP1Q5VVH5 260 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 FCRL6Q6DN72 434 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 PPP1R21Q6ZMI0 780 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 COX15Q7KZN9 410 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 LDB1Q86U70 411 aaPredicted RBP12.26□□□□□ -0.45
GPN3-203ENST00000543199 DCUN1D3Q8IWE4 304 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 DTWD1Q8N5C7 304 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 UBL4BQ8N7F7 174 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 OR6P1Q8NGX9 317 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 OR4L1Q8NH43 312 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 ATG4AQ8WYN0 398 aa12.26□□□□□ -0.45
GPN3-203ENST00000543199 FKBP10Q96AY3 582 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms