RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 MCATQ8IVS2 390 aaKnown RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 GALNT16Q8N428 558 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 TTC29Q8NA56 475 aaPredicted RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 LINC01555Q8NAE3 123 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 ZUFSPQ96AP4 578 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 TCF12Q99081 682 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 P2RY12Q9H244 342 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 WDR54Q9H977 334 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 IL1RAPL1Q9NZN1 696 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 MARCH4Q9P2E8 410 aaPredicted RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 NXT1Q9UKK6 140 aaKnown RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 MAP4K5Q9Y4K4 846 aa12.61□□□□□ -0.39
RTN3-212ENST00000543123 TNRC6AQ8NDV7 1962 aaKnown RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
RTN3-212ENST00000543123 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 DSCR3O14972 297 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 HCRTR1O43613 425 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 AGFG2O95081 481 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 ALBP02768 609 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 ESR1P03372 595 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 ITGAXP20702 1163 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 ATP5DP30049 168 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
RTN3-212ENST00000543123 CRADDP78560 199 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SLC9A5Q14940 896 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SIX1Q15475 284 aaPredicted RBP12.6□□□□□ -0.39
RTN3-212ENST00000543123 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
RTN3-212ENST00000543123 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 IRAK1BP1Q5VVH5 260 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SLC6A19Q695T7 634 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 LRRC8BQ6P9F7 803 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 FIGLAQ6QHK4 219 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 LDB1Q86U70 411 aaPredicted RBP12.6□□□□□ -0.39
RTN3-212ENST00000543123 TAX1BP1Q86VP1 789 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 IQCKQ8N0W5 287 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 LMNTD1Q8N9Z9 388 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 HMGCLL1Q8TB92 370 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SELENOSQ9BQE4 189 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 LRRC4CQ9HCJ2 640 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 LZTFL1Q9NQ48 299 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 FAM114A2Q9NRY5 505 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 P4HTMQ9NXG6 502 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SPATA7Q9P0W8 599 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 SAMD15Q9P1V8 674 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
RTN3-212ENST00000543123 AGPSO00116 658 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 SRPX2O60687 465 aaPredicted RBP12.59□□□□□ -0.39
RTN3-212ENST00000543123 VAPBO95292 243 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 MMP11P24347 488 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 MGAT1P26572 445 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 NMBRP28336 390 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
RTN3-212ENST00000543123 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
RTN3-212ENST00000543123 RAPSNQ13702 412 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 GRB7Q14451 532 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 OVCH1Q7RTY7 1134 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 PPP1R32Q7Z5V6 425 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 C2orf73Q8N5S3 287 aaPredicted RBP12.59□□□□□ -0.39
RTN3-212ENST00000543123 IL17FQ96PD4 163 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
RTN3-212ENST00000543123 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 B3GNT3Q9Y2A9 372 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 KLHL20Q9Y2M5 609 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
RTN3-212ENST00000543123 SPTBN1Q01082 2364 aaKnown RBP12.58□□□□□ -0.4
RTN3-212ENST00000543123 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
RTN3-212ENST00000543123 ZNF839A8K0R7 811 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 E5RI56 91 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 CEP104O60308 925 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 PHF2O75151 1096 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 C1orf105O95561 183 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 ONECUT2O95948 504 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 CTSBP07858 339 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 ERVK-10P10266 1014 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 OGNP20774 298 aaKnown RBP12.58□□□□□ -0.4
RTN3-212ENST00000543123 GNLYP22749 145 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 GCGRP47871 477 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 SOX8P57073 446 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 TTLL9Q3SXZ7 439 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 KIAA0930Q6ICG6 404 aaPredicted RBP12.58□□□□□ -0.4
RTN3-212ENST00000543123 CASC4Q6P4E1 433 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 CNSTQ6PJW8 725 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 IGFL3Q6UXB1 125 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 FAM20CQ8IXL6 584 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 ZADH2Q8N4Q0 377 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
RTN3-212ENST00000543123 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
RTN3-212ENST00000543123 SLC26A1Q9H2B4 701 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms