RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 POLR2IP36954 125 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 GP5P40197 560 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CHRNA4P43681 627 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 STX1BP61266 288 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC13A2Q13183 592 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 POLD3Q15054 466 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PAGE2BQ5JRK9 111 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 STXBP5Q5T5C0 1151 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 SEL1L3Q68CR1 1132 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PKN3Q6P5Z2 889 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 C1orf122Q6ZSJ8 110 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CAMK1DQ8IU85 385 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 CNTN4Q8IWV2 1026 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 LGI2Q8N0V4 545 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 TMEM169Q96HH4 297 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ILKAPQ9H0C8 392 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ZBP1Q9H171 429 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF334Q9HCZ1 680 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ENTPD7Q9NQZ7 604 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 TREX1Q9NSU2 369 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PKD2L2Q9NZM6 624 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 ACTR3BQ9P1U1 418 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 MBD1Q9UIS9 605 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 STOML2Q9UJZ1 356 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 SNX6Q9UNH7 406 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 PCDHB12Q9Y5F1 795 aa7.82□□□□□ -1.16
PDLIM5-221ENST00000542407 F5H5T6 163 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 GFRA2O00451 464 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ASNA1O43681 348 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 EFCAB14O75071 495 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 PTP4A3O75365 173 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 GJB3O75712 270 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CHRM5P08912 532 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MYF6P23409 242 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ADH7P40394 386 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 RENBPP51606 427 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 LIMK2P53671 638 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 WNT3AP56704 352 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 YBEYP58557 167 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 LSM3P62310 102 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 DSC2Q02487 901 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 TWF1Q12792 350 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 POU6F1Q14863 301 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 PCID2Q5JVF3 399 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 TBCELQ5QJ74 424 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SPOUT1Q5T280 376 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 KCNMB4Q86W47 210 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 GPR65Q8IYL9 337 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CFAP52Q8N1V2 620 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ZFP90Q8TF47 636 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SNX19Q92543 992 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 TRIM63Q969Q1 353 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 DEPDC7Q96QD5 511 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 IL21Q9HBE4 155 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 NT5MQ9NPB1 228 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MAN2B2Q9Y2E5 1009 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CHTOPQ9Y3Y2 248 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 TCAF1Q9Y4C2 921 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 INSL5Q9Y5Q6 135 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ZFP37Q9Y6Q3 630 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 A0A0D9SEW6 157 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 A0A1B0GTQ1 180 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SOCS5O75159 536 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 PMPCBO75439 489 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MFN2O95140 757 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 DLGAP3O95886 979 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 F11P03951 625 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SAT1P21673 171 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC7A1P30825 629 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 OR1E1P30953 314 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 BMPR1AP36894 532 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CAPZA2P47755 286 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MAXP61244 160 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 HTRA4P83105 476 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ZXDBP98169 803 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 IL1RL1Q01638 556 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 RAD51Q06609 339 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 DOC2AQ14183 400 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MARC1Q5VT66 337 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 UGT3A1Q6NUS8 523 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 PLEKHM3Q6ZWE6 761 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SLCO6A1Q86UG4 719 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 DENND1CQ8IV53 801 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 FAM109AQ8N4B1 249 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ACVR1CQ8NER5 493 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 MAGEE2Q8TD90 523 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC22A18Q96BI1 424 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 ZNF641Q96N77 438 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CSF3RQ99062 836 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 HOXD1Q9GZZ0 328 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 GKN1Q9NS71 199 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 IFT80Q9P2H3 777 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 SLC2A6Q9UGQ3 507 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 VPS28Q9UK41 221 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 AGO1Q9UL18 857 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 CDYLQ9Y232 598 aa7.81□□□□□ -1.16
PDLIM5-221ENST00000542407 GMPPBQ9Y5P6 360 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms