RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CFAP61Q8NHU2 1237 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 LPGAT1Q92604 370 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 MFSD3Q96ES6 412 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 ZNF285Q96NJ3 590 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 BIRC8Q96P09 236 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 C5AR2Q9P296 337 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 ANKMY1Q9P2S6 941 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 DHCR7Q9UBM7 475 aaKnown RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 VPS9D1Q9Y2B5 631 aa15.02■□□□□ -0
VPS33A-206ENST00000542310 PTRH2Q9Y3E5 179 aaKnown RBP15.02■□□□□ -0
VPS33A-206ENST00000542310 TARM1B6A8C7 271 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 PRICKLE3O43900 615 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-206ENST00000542310 VAPBO95292 243 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 ALBP02768 609 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 PIM1P11309 404 aaPredicted RBP15.01□□□□□ -0.01
VPS33A-206ENST00000542310 VARSP26640 1264 aaKnown RBP15.01□□□□□ -0.01
VPS33A-206ENST00000542310 OTX2P32243 289 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 KCNJ1P48048 391 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 NADK2Q4G0N4 442 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 MLIPQ5VWP3 458 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 MCATQ8IVS2 390 aaKnown RBP15.01□□□□□ -0.01
VPS33A-206ENST00000542310 FAM26EQ8N5C1 309 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 LMNTD1Q8N9Z9 388 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 CLEC1AQ8NC01 280 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 GALNT11Q8NCW6 608 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 CPT1CQ8TCG5 803 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 ZUFSPQ96AP4 578 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 IL17FQ96PD4 163 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 NUDT9Q9BW91 350 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 WDR54Q9H977 334 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 FAM169AQ9Y6X4 670 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 HEATR5BQ9P2D3 2071 aa15.01□□□□□ -0.01
VPS33A-206ENST00000542310 FITM1A5D6W6 292 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 TTLL8A6PVC2 850 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 PEX12O00623 359 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 DSCR3O14972 297 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 ZNF185O15231 689 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 MATN4O95460 622 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 CTSBP07858 339 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 ERGP11308 486 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 MLNP12872 115 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 BDKRB1P46663 353 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 GRM7Q14831 915 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 SF1Q15637 639 aaKnown RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 DCAF10Q5QP82 559 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 FCRL6Q6DN72 434 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 FIGLAQ6QHK4 219 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 TAX1BP1Q86VP1 789 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 RASGEF1CQ8N431 466 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 TTC29Q8NA56 475 aaPredicted RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 SKA2Q8WVK7 121 aaPredicted RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 PNPLA2Q96AD5 504 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 PTERQ96BW5 349 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 SLC26A1Q9H2B4 701 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 INTS10Q9NVR2 710 aaKnown RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 NXT1Q9UKK6 140 aaKnown RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
VPS33A-206ENST00000542310 PPP2R2CQ9Y2T4 447 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 NFS1Q9Y697 457 aa15□□□□□ -0.01
VPS33A-206ENST00000542310 TCRBV7S3A2A0A539 114 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CNOT3O75175 753 aaKnown RBP14.99□□□□□ -0.01
VPS33A-206ENST00000542310 VPS4BO75351 444 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 IPO13O94829 963 aaKnown RBP14.99□□□□□ -0.01
VPS33A-206ENST00000542310 ALPPP05187 535 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 UMODP07911 640 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CXCR5P32302 372 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 GRIA3P42263 894 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 SOX8P57073 446 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 GPS1Q13098 491 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 MYBPC3Q14896 1274 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CYP2A13Q16696 494 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 JMJD6Q6NYC1 403 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CNSTQ6PJW8 725 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 RNF44Q7L0R7 432 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CILP2Q8IUL8 1156 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 FAM20CQ8IXL6 584 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 OR2L3Q8NG85 312 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 NAP1L3Q99457 506 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-206ENST00000542310 SELENOSQ9BQE4 189 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 XAB2Q9HCS7 855 aaKnown RBP14.99□□□□□ -0.01
VPS33A-206ENST00000542310 SLC22A11Q9NSA0 550 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CUTCQ9NTM9 273 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 P4HTMQ9NXG6 502 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 IL1RAPL1Q9NZN1 696 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 SAMD15Q9P1V8 674 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 CIDEBQ9UHD4 219 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 VPS4AQ9UN37 437 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 KLHL20Q9Y2M5 609 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 MAP4K5Q9Y4K4 846 aa14.99□□□□□ -0.01
VPS33A-206ENST00000542310 MDC1Q14676 2089 aaKnown RBP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 FAM237BA0A1B0GVD1 139 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 SRPX2O60687 465 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 PHF2O75151 1096 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 NIPSNAP2O75323 286 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 ITGAXP20702 1163 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 FMO4P31512 558 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 SRSF1Q07955 248 aaKnown RBP eCLIP14.98□□□□□ -0.01
VPS33A-206ENST00000542310 ARHGAP19Q14CB8 494 aa14.98□□□□□ -0.01
VPS33A-206ENST00000542310 CYP1B1Q16678 543 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms