RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-226	ENST00000541968	CASP9	P55211	416 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	OLR1	P78380	273 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMEM115	Q12893	351 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	GRIK2	Q13002	908 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	RIPK1	Q13546	671 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	PDK1	Q15118	436 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	IMMT	Q16891	758 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TWISTNB	Q3B726	338 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMEM30B	Q3MIR4	351 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC39A12	Q504Y0	691 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	DCST1	Q5T197	706 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CCNYL2	Q5T2Q4	361 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC35E4	Q6ICL7	350 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC25A24	Q6NUK1	477 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CDC73	Q6P1J9	531 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ADCK2	Q7Z695	626 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CTAGE6	Q86UF2	777 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	HOOK3	Q86VS8	718 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	MAP7D3	Q8IWC1	876 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ARHGAP12	Q8IWW6	846 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CTAGE4	Q8IX94	777 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	FBXW8	Q8N3Y1	598 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	XXYLT1	Q8NBI6	393 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMEM116	Q8NCL8	245 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TAS1R2	Q8TE23	839 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	PRCC	Q92733	491 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CORO2A	Q92828	525 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	GTF3C6	Q969F1	213 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SMARCE1	Q969G3	411 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	LRRC59	Q96AG4	307 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	INTS12	Q96CB8	462 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CNOT6L	Q96LI5	555 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	GAL3ST4	Q96RP7	486 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ACOX2	Q99424	681 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SCPEP1	Q9HB40	452 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TRPV5	Q9NQA5	729 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ASAH2	Q9NR71	780 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	DDX18	Q9NVP1	670 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	HAO1	Q9UJM8	370 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	FBXL2	Q9UKC9	423 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CDH7	Q9ULB5	785 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ACSL5	Q9ULC5	683 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	ITM2B	Q9Y287	266 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	PTRH2	Q9Y3E5	179 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	CLCA3P	Q9Y6N3	262 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	SNED1	Q8TER0	1413 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	TTC21B	Q7Z4L5	1316 aa		4.2	□□□□□ -1.74
RAP1B-226	ENST00000541968	FAM237A	A0A1B0GTK4	181 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	OR2A25	A4D2G3	310 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968		L7N2F9	121 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC33A1	O00400	549 aa	Predicted RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	IFIT3	O14879	490 aa	Known RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	LETM1	O95202	739 aa	Predicted RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	IGHV4-39	P01824	125 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	FAM106CP	P0CH98	169 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	IL7R	P16871	459 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	GDI1	P31150	447 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	PBX3	P40426	434 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MAGEA4	P43358	317 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	KHK	P50053	298 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	CLDN20	P56880	219 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	ASIC1	P78348	528 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	RPL24	P83731	157 aa	Known RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	GAGE5	Q13069	117 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	GAGE6	Q13070	117 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	RPS6KA1	Q15418	735 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	DECR1	Q16698	335 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	FUT11	Q495W5	492 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	C18orf63	Q68DL7	685 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	CENPP	Q6IPU0	288 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC27A1	Q6PCB7	646 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	PPP1R21	Q6ZMI0	780 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	DPPA4	Q7L190	304 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	TAF8	Q7Z7C8	310 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	LRRC43	Q8N309	656 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	AFAP1	Q8N556	730 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MINDY1	Q8N5J2	469 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	IQUB	Q8NA54	791 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	TAAR8	Q969N4	342 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	IGSF8	Q969P0	613 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMCO6	Q96DC7	493 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	STAMBPL1	Q96FJ0	436 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MAP7D2	Q96T17	732 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	LITAF	Q99732	161 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MGME1	Q9BQP7	344 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	CCDC106	Q9BWC9	280 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	TRIM7	Q9C029	511 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	GFRA4	Q9GZZ7	299 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	RWDD1	Q9H446	243 aa	Predicted RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	TCP11L1	Q9NUJ3	509 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	CYP39A1	Q9NYL5	469 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	HMG20B	Q9P0W2	317 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	INTS6	Q9UL03	887 aa	Known RBP	4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MKLN1	Q9UL63	735 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	GRID1	Q9ULK0	1009 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	MTMR6	Q9Y217	621 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms