RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 SOX17Q9H6I2 414 aaPredicted RBP23.02■■□□□ 1.28
LEMD3-203ENST00000541171 CUTCQ9NTM9 273 aa23.02■■□□□ 1.28
LEMD3-203ENST00000541171 INTS7Q9NVH2 962 aaKnown RBP23.02■■□□□ 1.28
LEMD3-203ENST00000541171 ANAPC5Q9UJX4 755 aa23.02■■□□□ 1.28
LEMD3-203ENST00000541171 PCDHGA10Q9Y5H3 936 aa23.02■■□□□ 1.28
LEMD3-203ENST00000541171 CSAG2Q9Y5P2 127 aa23.02■■□□□ 1.28
LEMD3-203ENST00000541171 ANKRD12Q6UB98 2062 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 SUN1O94901 812 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 S1PR4O95977 384 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 PPARGP37231 505 aaPredicted RBP23.01■■□□□ 1.27
LEMD3-203ENST00000541171 FDFT1P37268 417 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 KIF5AQ12840 1032 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 NKG7Q16617 165 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 ZC3H12BQ5HYM0 836 aaKnown RBP23.01■■□□□ 1.27
LEMD3-203ENST00000541171 PRAMEF13Q5VWM6 474 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 UNC5DQ6UXZ4 953 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 PARP9Q8IXQ6 854 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 OR2L8Q8NGY9 312 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 DENND1AQ8TEH3 1009 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 FKBP10Q96AY3 582 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 MRFAP1L1Q96HT8 127 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 RIMKLBQ9ULI2 386 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 ZNF148Q9UQR1 794 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 TCAF1Q9Y4C2 921 aa23.01■■□□□ 1.27
LEMD3-203ENST00000541171 WIPF3A6NGB9 483 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 SOCS6O14544 535 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 DSCR3O14972 297 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 LIASO43766 372 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 ETS1P14921 441 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 OR1D4P47884 311 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 ACVR1Q04771 509 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 GRM7Q14831 915 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 TMED2Q15363 201 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 COX15Q7KZN9 410 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 TTC29Q8NA56 475 aaPredicted RBP23■■□□□ 1.27
LEMD3-203ENST00000541171 BAG1Q99933 345 aaPredicted RBP23■■□□□ 1.27
LEMD3-203ENST00000541171 WDR77Q9BQA1 342 aaPredicted RBP23■■□□□ 1.27
LEMD3-203ENST00000541171 SELENOSQ9BQE4 189 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 DESI2Q9BSY9 194 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 RAB6BQ9NRW1 208 aa23■■□□□ 1.27
LEMD3-203ENST00000541171 RASGRF2O14827 1237 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 ALBP02768 609 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 AOAHP28039 575 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 SNX1Q13596 522 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 TCTE1Q5JU00 501 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 IRAK1BP1Q5VVH5 260 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 PTRHD1Q6GMV3 140 aaKnown RBP22.99■■□□□ 1.27
LEMD3-203ENST00000541171 TTC23LQ6PF05 361 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 NLRP9Q7RTR0 991 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 DTWD1Q8N5C7 304 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 PPHLN1Q8NEY8 458 aaKnown RBP22.99■■□□□ 1.27
LEMD3-203ENST00000541171 GSDMBQ8TAX9 411 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 DNAJB14Q8TBM8 379 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 SKA2Q8WVK7 121 aaPredicted RBP22.99■■□□□ 1.27
LEMD3-203ENST00000541171 UBE2Q2Q8WVN8 375 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 C1orf54Q8WWF1 131 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 HES6Q96HZ4 224 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 SPSB2Q99619 263 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 WDR54Q9H977 334 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 AGPAT4Q9NRZ5 378 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 CATSPERZQ9NTU4 200 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 MARCH4Q9P2E8 410 aaPredicted RBP22.99■■□□□ 1.27
LEMD3-203ENST00000541171 CTSFQ9UBX1 484 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 HS3ST3B1Q9Y662 390 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 MAU2Q9Y6X3 613 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 MDC1Q14676 2089 aaKnown RBP22.99■■□□□ 1.27
LEMD3-203ENST00000541171 DOPEY1Q5JWR5 2465 aa22.99■■□□□ 1.27
LEMD3-203ENST00000541171 PRMT5O14744 637 aaPredicted RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 DCTP40126 519 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 BDKRB1P46663 353 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 VSX2P58304 361 aaPredicted RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 OASLQ15646 514 aaKnown RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 RBBP7Q16576 425 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 AARS2Q5JTZ9 985 aaKnown RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 AGAP7PQ5VUJ5 663 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 KIRREL2Q6UWL6 708 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 NACC2Q96BF6 587 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 CNDP1Q96KN2 507 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 AGAP4Q96P64 663 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 CHRAC1Q9NRG0 131 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 TTC7AQ9ULT0 858 aaPredicted RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 NOVA2Q9UNW9 492 aaKnown RBP22.98■■□□□ 1.27
LEMD3-203ENST00000541171 CACNA1DQ01668 2161 aa22.98■■□□□ 1.27
LEMD3-203ENST00000541171 KRT87PA6NCN2 255 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 SLCO2B1O94956 709 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 ONECUT2O95948 504 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 APRTP07741 180 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 PSMB5P28074 263 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 CCSMST1Q4G0I0 132 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 WASHC2DQ5SRD0 308 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 SEL1L2Q5TEA6 688 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 YOD1Q5VVQ6 348 aaPredicted RBP22.97■■□□□ 1.27
LEMD3-203ENST00000541171 PPP4R1Q8TF05 950 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 MIPEPQ99797 713 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 SLC26A1Q9H2B4 701 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 RUVBL2Q9Y230 463 aaKnown RBP22.97■■□□□ 1.27
LEMD3-203ENST00000541171 NFS1Q9Y697 457 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 CAPN6Q9Y6Q1 641 aa22.97■■□□□ 1.27
LEMD3-203ENST00000541171 CD3EAPO15446 510 aaKnown RBP22.96■■□□□ 1.27
LEMD3-203ENST00000541171 CTSVO60911 334 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms