RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 DENND1AQ8TEH3 1009 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 KIAA1191Q96A73 305 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 ZUFSPQ96AP4 578 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 ZNF578Q96N58 590 aaPredicted RBP18.14■□□□□ 0.49
VPS33A-205ENST00000541169 SLC46A1Q96NT5 459 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 FCRL4Q96PJ5 515 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 TAAR9Q96RI9 348 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 MAP3K3Q99759 626 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 DDA1Q9BW61 102 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 EPB41L4BQ9H329 900 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 PDE7BQ9NP56 450 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 PLAGL1Q9UM63 463 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 OARD1Q9Y530 152 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 PCDHGA7Q9Y5G6 932 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 PCDHGA3Q9Y5H0 932 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 KLK4Q9Y5K2 254 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 A0A096LPK6 155 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 HMX2A2RU54 273 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 A8MU76 341 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 NVLO15381 856 aaKnown RBP18.13■□□□□ 0.49
VPS33A-205ENST00000541169 PHGDHO43175 533 aaKnown RBP18.13■□□□□ 0.49
VPS33A-205ENST00000541169 CDH16O75309 829 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 C2P06681 752 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ANXA5P08758 320 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 SPINK2P20155 84 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 MPSTP25325 297 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 RPA3P35244 121 aaPredicted RBP18.13■□□□□ 0.49
VPS33A-205ENST00000541169 HSD17B3P37058 310 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 CSRP3P50461 194 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ZNF460Q14592 562 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ACAP2Q15057 778 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 SF1Q15637 639 aaKnown RBP18.13■□□□□ 0.49
VPS33A-205ENST00000541169 CCSMST1Q4G0I0 132 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 SBSNQ6UWP8 590 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 RIBC1Q8N443 379 aaPredicted RBP18.13■□□□□ 0.49
VPS33A-205ENST00000541169 RHEBL1Q8TAI7 183 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ACMSDQ8TDX5 336 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ZNF480Q8WV37 535 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ANKRD49Q8WVL7 239 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 FBXL8Q96CD0 374 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 TSNARE1Q96NA8 513 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 FANCEQ9HB96 536 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 ADAMTS6Q9UKP5 1117 aa18.13■□□□□ 0.49
VPS33A-205ENST00000541169 IGHV5-51A0A0C4DH38 117 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 SYCE1LA8MT33 242 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 E7ENX8 843 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 PRICKLE3O43900 615 aaPredicted RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 ALDOAP04075 364 aaKnown RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CD1DP15813 335 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CD82P27701 267 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CMPK1P30085 196 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 MAGEA12P43365 314 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 TAP2Q03519 686 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 BMPR2Q13873 1038 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CSHL1Q14406 222 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 PPP1R3AQ16821 1122 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 TSNAXIP1Q2TAA8 658 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 DCAF12Q5T6F0 453 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 UBAP2Q5T6F2 1119 aaKnown RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CEACAM20Q6UY09 585 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CMC1Q7Z7K0 106 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 FAM129CQ86XR2 697 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 DLG3Q92796 817 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 GATA6Q92908 595 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 TRAPPC9Q96Q05 1148 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 MIPEPQ99797 713 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 ROPN1BQ9BZX4 212 aaPredicted RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CNOT10Q9H9A5 744 aaKnown RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 ROPN1Q9HAT0 212 aaPredicted RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CCDC177Q9NQR7 707 aaPredicted RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 SOHLH2Q9NX45 425 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 SLC39A1Q9NY26 324 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 SPHK1Q9NYA1 384 aa18.12■□□□□ 0.49
VPS33A-205ENST00000541169 STOX2Q9P2F5 926 aaPredicted RBP18.12■□□□□ 0.49
VPS33A-205ENST00000541169 CCDC151A5D8V7 595 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 EFCAB7A8K855 629 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 POLR1CO15160 346 aaPredicted RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 KIF1CO43896 1103 aaKnown RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 TNFSF15O95150 251 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 KLHL2O95198 593 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 S100BP04271 92 aaPredicted RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 FGF3P11487 239 aaPredicted RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 IMPA1P29218 277 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 RELAQ04206 551 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 PHKG1Q16816 387 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 CAPN13Q6MZZ7 669 aaPredicted RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 AGTRAPQ6RW13 159 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 CLEC14AQ86T13 490 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 CROCCP2Q86T23 111 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 GPSM1Q86YR5 675 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 BMPERQ8N8U9 685 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 C19orf47Q8N9M1 422 aaKnown RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 OR2A1Q8NGT9 310 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 FLVCR1-AS1Q8TAF5 88 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 IL17FQ96PD4 163 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 HAUS8Q9BT25 410 aa18.11■□□□□ 0.49
VPS33A-205ENST00000541169 CCDC86Q9H6F5 360 aaKnown RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 SIDT1Q9NXL6 827 aaKnown RBP18.11■□□□□ 0.49
VPS33A-205ENST00000541169 PISDQ9UG56 409 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms