RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PDYNP01213 254 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 HOXC8P31273 242 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TTPAP49638 278 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 FCGRTP55899 365 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 HIST2H2ACQ16777 129 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 MORN1Q5T089 497 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ADNP2Q6IQ32 1131 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 FKBP9P1Q75LS8 142 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 MRPL10Q7Z7H8 261 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 GPR149Q86SP6 731 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TMEM173Q86WV6 379 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PLD3Q8IV08 490 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLECL1Q8IZS7 167 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TTC30BQ8N4P2 665 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 OR52J3Q8NH60 311 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 KCNJ9Q92806 393 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 APOLD1Q96LR9 279 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TNKS2Q9H2K2 1166 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 DSN1Q9H410 356 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ACOT13Q9NPJ3 140 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 C1orf109Q9NX04 203 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 B3GNT3Q9Y2A9 372 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 H3BNC9 293 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ADAM12O43184 909 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 KCNK2O95069 426 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CD160O95971 181 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 OTCP00480 354 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 OPN1SWP03999 348 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ACPPP15309 386 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 GADD45AP24522 165 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ARF5P84085 180 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 MGAT3Q09327 533 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 DOC2BQ14184 412 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 STEAP3Q658P3 488 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TTC29Q8NA56 475 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 POC5Q8NA72 575 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 MCFD2Q8NI22 146 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 APIPQ96GX9 242 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PYURFQ96I23 114 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CCDC115Q96NT0 180 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CPPED1Q9BRF8 314 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PARVBQ9HBI1 364 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 IL37Q9NZH6 218 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 OPTCQ9UBM4 332 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ORC6Q9Y5N6 252 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 WBP4O75554 376 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CPSF4O95639 269 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 EPOP01588 193 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 S100BP04271 92 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CR2P20023 1033 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TGFBR2P37173 567 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 GNPDA1P46926 289 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PRSS55Q6UWB4 352 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TAS1R1Q7RTX1 841 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 EFL1Q7Z2Z2 1120 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 SERINC5Q86VE9 423 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 NLGN4XQ8N0W4 816 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 LMNTD1Q8N9Z9 388 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CAPSLQ8WWF8 208 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 FOXJ1Q92949 421 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZHX1-C8orf76Q96EF9 292 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 KATNAL1Q9BW62 490 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRIT1Q9H3H1 467 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 FBXO44Q9H4M3 255 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLMPQ9H6B4 373 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 RUBCNLQ9H714 662 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 USE1Q9NZ43 259 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 NUDT4Q9NZJ9 180 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 NAALAD2Q9Y3Q0 740 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 SAMHD1Q9Y3Z3 626 aaKnown RBP10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 PCDHB5Q9Y5E4 795 aa10.1□□□□□ -0.79
CDC42SE1-207ENST00000540998 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 IFRD1O00458 451 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 MANBAO00462 879 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 YY2O15391 372 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 F11P03951 625 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 NTRK1P04629 796 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 RHOCP08134 193 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 HSMCR30P0CW71 290 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 EPORP19235 508 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 MSH3P20585 1137 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 CTGFP29279 349 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 GZMMP51124 257 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 GABARAPL2P60520 117 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 USP39Q53GS9 565 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF648Q5T619 568 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 SVOPLQ8N434 492 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 CELF2-AS1Q8N7Q2 184 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 WFDC5Q8TCV5 224 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 Q96MT0 163 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF641Q96N77 438 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 PARK7Q99497 189 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ASPSCR1Q9BZE9 553 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 WDR12Q9GZL7 423 aaKnown RBP10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 P2RY12Q9H244 342 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 DCSTAMPQ9H295 470 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 ASB8Q9H765 288 aa10.09□□□□□ -0.79
CDC42SE1-207ENST00000540998 KIF17Q9P2E2 1029 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms