RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	CBSL	P0DN79	551 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	SFTPC	P11686	197 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	CBS	P35520	551 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	CCNF	P41002	786 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	PMS2	P54278	862 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	RPS15	P62841	145 aa	Known RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	YBX1	P67809	324 aa	Known RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	DR1	Q01658	176 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	FASTK	Q14296	549 aa	Known RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	NCF4	Q15080	339 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	CYP2A13	Q16696	494 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	KLHL38	Q2WGJ6	581 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	BBS9	Q3SYG4	887 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	HSP90AA5P	Q58FG0	334 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	C1orf189	Q5VU69	101 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	GPR135	Q8IZ08	494 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	ZNF655	Q8N720	491 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	CD200R1	Q8TD46	325 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	ADAMTS17	Q8TE56	1095 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	KCNJ9	Q92806	393 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	SLC22A18	Q96BI1	424 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	FOPNL	Q96NB1	174 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	GBP5	Q96PP8	586 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	GPR21	Q99679	349 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	EBNA1BP2	Q99848	306 aa	Known RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	TRIM55	Q9BYV6	548 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	EURL	Q9NYK6	297 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	DHCR7	Q9UBM7	475 aa	Known RBP	13.11	□□□□□ -0.31
POLE-215	ENST00000540987	PLCL2	Q9UPR0	1127 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	MAN2B2	Q9Y2E5	1009 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987	SAR1B	Q9Y6B6	198 aa		13.11	□□□□□ -0.31
POLE-215	ENST00000540987		K7EM74	188 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	MYO1C	O00159	1063 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TP73	O15350	636 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TTI1	O43156	1089 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	SLC28A2	O43868	658 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CTSV	O60911	334 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CNOT3	O75175	753 aa	Known RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	DNAJB5	O75953	348 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	HAUS5	O94927	633 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	ERVK-10	P10266	1014 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	NR1D1	P20393	614 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	ITGAX	P20702	1163 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	GABRB3	P28472	473 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	GRIA3	P42263	894 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CHAF1B	Q13112	559 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	RHBDD2	Q6NTF9	364 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TTC23L	Q6PF05	361 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	FIGLA	Q6QHK4	219 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	NEK10	Q6ZWH5	1172 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	PRICKLE2	Q7Z3G6	844 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TMEM151B	Q8IW70	566 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	LMNTD2	Q8IXW0	634 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	OR2L3	Q8NG85	312 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CALML6	Q8TD86	181 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	N4BP2L2	Q92802	583 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	ABHD17A	Q96GS6	310 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	NDN	Q99608	321 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	MIPEP	Q99797	713 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	AARSD1	Q9BTE6	412 aa	Known RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	NLN	Q9BYT8	704 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	SLC6A20	Q9NP91	592 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TCFL5	Q9UL49	500 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	CHMP2B	Q9UQN3	213 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	DHRS7	Q9Y394	339 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	MRFAP1	Q9Y605	127 aa		13.1	□□□□□ -0.31
POLE-215	ENST00000540987	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
POLE-215	ENST00000540987	TENM4	Q6N022	2769 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SEC16A	O15027	2179 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	RFPL1	O75677	317 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SEC31A	O94979	1220 aa	Known RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	FKBP9	O95302	570 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	HBQ1	P09105	142 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	MPC1L	P0DKB6	136 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	ATXN8OS	P0DMR3	200 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	MCM3	P25205	808 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	ITGA8	P53708	1063 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	FOXL2	P58012	376 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SLC9A5	Q14940	896 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	MORF4L2	Q15014	288 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SF1	Q15637	639 aa	Known RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	TTLL9	Q3SXZ7	439 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SPANXN3	Q5MJ09	141 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	RBM20	Q5T481	1227 aa	Known RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	PCGF5	Q86SE9	256 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	PTRH1	Q86Y79	214 aa	Known RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	MCAT	Q8IVS2	390 aa	Known RBP	13.09	□□□□□ -0.31
POLE-215	ENST00000540987	CNTN4	Q8IWV2	1026 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	CPNE9	Q8IYJ1	553 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	OR2A1	Q8NGT9	310 aa		13.09	□□□□□ -0.31
POLE-215	ENST00000540987	OR9A1P	Q8NGU1	263 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms