RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PRAMEF17Q5VTA0 474 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 FAM45BPQ6NSW5 357 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 C6orf15Q6UXA7 325 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 CDHR3Q6ZTQ4 885 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 UBE2R2Q712K3 238 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 BPHLQ86WA6 291 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 TMEM126BQ8IUX1 230 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 CTAGE3PQ8IX95 158 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 MYO1HQ8N1T3 1032 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 GALNT6Q8NCL4 622 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 OR8K5Q8NH50 307 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 FAM45AQ8TCE6 357 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 IFT81Q8WYA0 676 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ZNF501Q96CX3 271 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 LINGO1Q96FE5 620 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 TCTN2Q96GX1 697 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 PKP4Q99569 1192 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ACAT2Q9BWD1 397 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 TWSG1Q9GZX9 223 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 LRRC4CQ9HCJ2 640 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 FAM60AQ9NP50 221 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 SMYD2Q9NRG4 433 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ZDHHC18Q9NUE0 388 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 NSMCE4AQ9NXX6 385 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 SPATA7Q9P0W8 599 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 MTRF1LQ9UGC7 380 aaKnown RBP8.9□□□□□ -0.98
SNHG1-215ENST00000540904 SERTAD3Q9UJW9 196 aa8.9□□□□□ -0.98
SNHG1-215ENST00000540904 ZZEF1O43149 2961 aa8.9□□□□□ -0.99
SNHG1-215ENST00000540904 FAM95CA0A1B0GW59 222 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 K7ENP7 123 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SCRG1O75711 98 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 DLGAP3O95886 979 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SLC16A8O95907 504 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 GSTA2P09210 222 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 MSL3P1P0C860 447 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 ERGP11308 486 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 LIFP15018 202 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 CYP2A7P20853 494 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 OAS2P29728 719 aaKnown RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 HSD17B2P37059 387 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 TAS2R39P59534 338 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 ARHGAP19Q14CB8 494 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 DEFB110Q30KQ9 67 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 LRRC8EQ6NSJ5 796 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 INO80CQ6PI98 192 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SUSD1Q6UWL2 747 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 CYS1Q717R9 158 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 GPR155Q7Z3F1 870 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SYTL1Q8IYJ3 562 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 ESX1Q8N693 406 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 EFCAB3Q8N7B9 438 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 PPFIBP2Q8ND30 876 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 OR1L3Q8NH93 324 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 HMGCLL1Q8TB92 370 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 MCOLN3Q8TDD5 553 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SMPDL3AQ92484 453 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 DLG3Q92796 817 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 KIAA1143Q96AT1 154 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 VPS39Q96JC1 886 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 FCRL4Q96PJ5 515 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 MIPEPQ99797 713 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 CPNE1Q99829 537 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 RHOJQ9H4E5 214 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 PRORYQ9H606 182 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 SYTL2Q9HCH5 934 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 ABCF3Q9NUQ8 709 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 INTS7Q9NVH2 962 aaKnown RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 RALYQ9UKM9 306 aaKnown RBP8.89□□□□□ -0.99
SNHG1-215ENST00000540904 ADAMTS6Q9UKP5 1117 aa8.89□□□□□ -0.99
SNHG1-215ENST00000540904 LOC101059948A0A1B0GTJ6 334 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 A0A1W2PPV9 198 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 FAM159BA6NKW6 160 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF839A8K0R7 811 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 E7EQ34 232 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 HCRTR1O43613 425 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 PRICKLE3O43900 615 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 OR2B3O76000 313 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 TSPAN12O95859 305 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 C8GP07360 202 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 CCNYL3P0C7X3 344 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF37AP17032 561 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 WT1P19544 449 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 STX2P32856 288 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 RPA3P35244 121 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 GP5P40197 560 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 STAT5AP42229 794 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 GRIA3P42263 894 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 SLC12A2P55011 1212 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ITGA1P56199 1179 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 YBX1P67809 324 aaKnown RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ABHD18Q0P651 414 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
SNHG1-215ENST00000540904 MAP7Q14244 749 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 ZNF460Q14592 562 aa8.88□□□□□ -0.99
SNHG1-215ENST00000540904 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.996e-45■■■■■ 32.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms