RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CAPZBP47756 277 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NRG1Q02297 640 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 ATP1A4Q13733 1029 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 GPR19Q15760 415 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NDUFA9Q16795 377 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 LRRC8BQ6P9F7 803 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PPP1R21Q6ZMI0 780 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ZNF600Q6ZNG1 722 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 H2AFVQ71UI9 128 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 CPLX4Q7Z7G2 160 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 GLIS1Q8NBF1 620 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ZSWIM1Q9BR11 485 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 FAM153AQ9UHL3 310 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 FZD10Q9ULW2 581 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 A0A0U1RQJ8 604 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 SSU72P8A0A1W2PR75 194 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ANKRD34BA5PLL1 514 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 HDAC3O15379 428 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ANXA9O76027 345 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 SERPIND1P05546 499 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TPOP07202 933 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 GIMD1P0DJR0 217 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ATP5DP30049 168 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TRIM23P36406 574 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TMPRSS15P98073 1019 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PLGLB1Q02325 96 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 GPR18Q14330 331 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PDK2Q15119 407 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 QPCTQ16769 361 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PDPK2PQ6A1A2 396 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PTRHD1Q6GMV3 140 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 ZNF655Q8N720 491 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 P3H4Q92791 437 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 THOC3Q96J01 351 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 DPH2Q9BQC3 489 aaPredicted RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 VCXQ9H320 206 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 CAAP1Q9H8G2 361 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 PPANQ9NQ55 473 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 SEC14L3Q9UDX4 400 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 ATPIF1Q9UII2 106 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NXT1Q9UKK6 140 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 TCFL5Q9UL49 500 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
GNE-205ENST00000539815 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
GNE-205ENST00000539815 NPIPB15A6NHN6 443 aaPredicted RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 FAM72CH0Y354 149 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 NUAK1O60285 661 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 CD46P15529 392 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ADSLP30566 484 aaPredicted RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 HADHAP40939 763 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SLC19A1P41440 591 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 NR2C2P49116 596 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SPINT3P49223 89 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TRAF2Q12933 501 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 RIPK1Q13546 671 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 KCNAB1Q14722 419 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TTMPQ5BVD1 217 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TCP11X2Q5H9J9 407 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 FAM72AQ5TYM5 149 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 CES4AQ5XG92 561 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 CPZQ66K79 652 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 FAM72DQ6L9T8 149 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 JMJD6Q6NYC1 403 aaPredicted RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 NLRP9Q7RTR0 991 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 FAM72BQ86X60 149 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TMEM174Q8WUU8 243 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 MIB2Q96AX9 1013 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SMC6Q96SB8 1091 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 RIC8BQ9NVN3 520 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SMARCAL1Q9NZC9 954 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SLC17A4Q9Y2C5 497 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SPTBN5Q9NRC6 3674 aaKnown RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 CASKO14936 926 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 NDST3O95803 873 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 S100BP04271 92 aaPredicted RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 APOA4P06727 396 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 HEXBP07686 556 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 OR56A5P0C7T3 313 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ACPPP15309 386 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 NELFEP18615 380 aaKnown RBP7.37□□□□□ -1.23
GNE-205ENST00000539815 HTR1EP28566 365 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 GRK3P35626 688 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 GEMP55040 296 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SP140Q13342 867 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 GRM7Q14831 915 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 LLGL1Q15334 1064 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ISLR2Q6UXK2 745 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ANKMY2Q8IV38 441 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TRAM1L1Q8N609 369 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 FDCSPQ8NFU4 85 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ELMO1Q92556 727 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 SDCCAG3Q96C92 435 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ZNF559Q9BR84 538 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 C1GALT1Q9NS00 363 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 UBP1Q9NZI7 540 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 ERVK-11Q9UQG0 969 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 TCP11X1B4DZS4 312 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 VPS26AO75436 327 aa7.37□□□□□ -1.23
GNE-205ENST00000539815 USP1O94782 785 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms