RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MRASO14807 208 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PIP5K1BO14986 540 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 LILRB5O75023 590 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PCCBP05166 539 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 MPC1LP0DKB6 136 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 DRD1P21728 446 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 CD72P21854 359 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 NAA20P61599 178 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZXDCQ2QGD7 858 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 WSCD2Q2TBF2 565 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SULT1C3Q6IMI6 304 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 TRAPPC5Q8IUR0 188 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ANKRD60Q9BZ19 345 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 C8orf33Q9H7E9 229 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PARVBQ9HBI1 364 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 TMEM181Q9P2C4 612 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAF1Q9UNN5 650 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZFR2Q9UPR6 939 aaKnown RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 BTRCQ9Y297 605 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 TMEM98Q9Y2Y6 226 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 NUMA1Q14980 2115 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 GFYI3L273 518 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR7A17O14581 309 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 CRCPO75575 148 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR4F21O95013 312 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PAK4O96013 591 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 C8GP07360 202 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ERVPABLB-1P60509 514 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 TUBA4AP68366 448 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ABRQ12979 859 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SYTL3Q4VX76 610 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SAMD4BQ5PRF9 694 aaKnown RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PNCKQ6P2M8 343 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 GPRIN3Q6ZVF9 776 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SNX31Q8N9S9 440 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 TMEM159Q96B96 161 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PPWD1Q96BP3 646 aaKnown RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC25A23Q9BV35 468 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 MBNL1Q9NR56 388 aaKnown RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF232Q9UNY5 417 aa16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 PCYT1BQ9Y5K3 369 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 HEMK1Q9Y5R4 338 aaPredicted RBP16.63■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC5A10A0PJK1 596 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 PLOD2O00469 737 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ANXA5P08758 320 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 LINC00032P0C843 101 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF8P17098 575 aaPredicted RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 PDHA2P29803 388 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ARL1P40616 181 aaPredicted RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 FGL2Q14314 439 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 LETMD1Q6P1Q0 360 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 LAYNQ6UX15 382 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZBTB49Q6ZSB9 765 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 LARP4Q71RC2 724 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF547Q8IVP9 402 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 DDIASQ8IXT1 998 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR14C36Q8NHC7 312 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 HM13Q8TCT9 377 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF382Q96SR6 550 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 LGR4Q9BXB1 951 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 OSBPL6Q9BZF3 934 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 EPHX3Q9H6B9 360 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 IPPKQ9H8X2 491 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 CLK4Q9HAZ1 481 aaKnown RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 GIMAP2Q9UG22 337 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 CROTQ9UKG9 612 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 SHISA7A6NL88 538 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF839A8K0R7 811 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 KATNA1O75449 491 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 DNTTP04053 509 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 CKMT2P17540 419 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 NHSL2Q5HYW2 709 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 C8orf82Q6P1X6 216 aaPredicted RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 HEATR4Q86WZ0 1026 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 CDYL2Q8N8U2 506 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ANKFN1Q8N957 763 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 DNASE1L2Q92874 299 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 PHF7Q9BWX1 381 aaPredicted RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZCCHC2Q9C0B9 1178 aaKnown RBP16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 FAIMQ9NVQ4 179 aa16.62■□□□□ 0.25
PCDHB17P-201ENST00000539533 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 TMEM221A6NGB7 291 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 BOLA2-SMG1P6H3BVE0 249 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 GIPC1O14908 333 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 NRP2O60462 931 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 TIPRLO75663 272 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 HIST1H2AGP0C0S8 130 aaPredicted RBP16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 HIST1H2ADP20671 130 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 VARSP26640 1264 aaKnown RBP16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 ZNF658BQ4V348 819 aaPredicted RBP16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 BCL7AQ4VC05 210 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC44A4Q53GD3 710 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 PPP4R4Q6NUP7 873 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 SCIMPQ6UWF3 145 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 NEK10Q6ZWH5 1172 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 DHFR2Q86XF0 187 aa16.61■□□□□ 0.25
PCDHB17P-201ENST00000539533 CFAP206Q8IYR0 622 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms