RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 PKP4Q99569 1192 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 INPP5KQ9BT40 448 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZSCAN5AQ9BUG6 496 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 TRMT61BQ9BVS5 477 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ALG2Q9H553 416 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SFXN1Q9H9B4 322 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 EPS15L1Q9UBC2 864 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CNOT6Q9ULM6 557 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 TDRD6O60522 2096 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SCN2AQ99250 2005 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SCN3AQ9NY46 2000 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ARHGEF17Q96PE2 2063 aaPredicted RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 A0A1W2PP18 115 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DPPA5A6NC42 116 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 WASHC1A8K0Z3 465 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 RTCAO00442 366 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PGM3O95394 542 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FUCA1P04066 466 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 LAMP2P13473 410 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ATP6V1B1P15313 513 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ATP6V1C1P21283 382 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FCARP24071 287 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PRDX6P30041 224 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 HOXA9P31269 272 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PEX19P40855 299 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PXNP49023 591 aaPredicted RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 GSK3BP49841 420 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PFN3P60673 137 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DOC2AQ14183 400 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 MAPRE2Q15555 327 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 MAPKAPK3Q16644 382 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZNF542PQ5EBM4 170 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SWT1Q5T5J6 900 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 OR4F3Q6IEY1 312 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CES5AQ6NT32 575 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 WASH2PQ6VEQ5 465 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 THOC6Q86W42 341 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FAM86B1Q8N7N1 296 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CXorf40AQ8TE69 158 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SH3KBP1Q96B97 665 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 OTUB2Q96DC9 234 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CENPKQ9BS16 269 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SLC12A9Q9BXP2 914 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SPNS1Q9H2V7 528 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FBXL12Q9NXK8 326 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SH3BP4Q9P0V3 963 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 C5AR2Q9P296 337 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 LIMD1Q9UGP4 676 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FBXO10Q9UK96 956 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CDH7Q9ULB5 785 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 RWDD3Q9Y3V2 267 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FREM2Q5SZK8 3169 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 GNG14A0A1W2PPG7 69 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FEZF1A0PJY2 475 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PPM1DO15297 605 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 FKBP6O75344 327 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 BCAS2O75934 225 aaPredicted RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 SMNDC1O75940 238 aaKnown RBP eCLIP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZNF30P17039 623 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CYP2A7P20853 494 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DRD3P35462 400 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZFP36L2P47974 494 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 MC1RQ01726 317 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PON2Q15165 354 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 WSCD2Q2TBF2 565 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 XKR7Q5GH72 579 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 TBCELQ5QJ74 424 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 GPR65Q8IYL9 337 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 MMP21Q8N119 569 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DEFB119Q8N690 84 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZNF480Q8WV37 535 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 MIEF2Q96C03 454 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 RNF31Q96EP0 1072 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DTD2Q96FN9 168 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PDLIM5Q96HC4 596 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 KCTD14Q9BQ13 255 aaPredicted RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DPH2Q9BQC3 489 aaPredicted RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 KLHL4Q9C0H6 718 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 KLHL25Q9H0H3 589 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 TMEM245Q9H330 911 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 COQ10BQ9H8M1 238 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 LTB4R2Q9NPC1 389 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 IMP3Q9NV31 184 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 PRPF19Q9UMS4 504 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 BTBD3Q9Y2F9 522 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 DTNAQ9Y4J8 743 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 ZFC3H1O60293 1989 aaKnown RBP5.94□□□□□ -1.46
NOVA1-206ENST00000539517 CACNA1EQ15878 2313 aa5.94□□□□□ -1.46
NOVA1-206ENST00000539517 RNF103-CHMP3A0A140T963 221 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.93□□□□□ -1.46
NOVA1-206ENST00000539517 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.93□□□□□ -1.46
NOVA1-206ENST00000539517 FGF19O95750 216 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 KRT6AP02538 564 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 KRT6BP04259 564 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 CDKN2CP42773 168 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 KRT6CP48668 564 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 CLCNKAP51800 687 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 CDKL1Q00532 357 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 C16orf72Q14CZ0 275 aa5.93□□□□□ -1.46
NOVA1-206ENST00000539517 CYP27C1Q4G0S4 372 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms